Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d12
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86958-1|BAA13194.2| 1593|Homo sapiens KIAA0203 protein. 31 3.3
BC017556-1|AAH17556.1| 1594|Homo sapiens RB1-inducible coiled-co... 31 3.3
AB059622-1|BAB69690.1| 1594|Homo sapiens Rb1-inducible coiled co... 31 3.3
Z49835-1|CAA89996.1| 505|Homo sapiens protein disulfide isomera... 31 4.3
U75885-1|AAC51518.1| 505|Homo sapiens ER-60 protein protein. 31 4.3
U42068-1|AAC50331.1| 505|Homo sapiens P58 protein. 31 4.3
D83485-1|BAA11928.1| 505|Homo sapiens ER-60 protease protein. 31 4.3
D16234-1|BAA03759.1| 505|Homo sapiens phospholipase C-alpha pro... 31 4.3
DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein. 31 4.3
BC071878-1|AAH71878.1| 505|Homo sapiens protein disulfide isome... 31 4.3
BC065561-1|AAH65561.1| 832|Homo sapiens ARHGEF10L protein protein. 31 4.3
BC036000-1|AAH36000.4| 505|Homo sapiens protein disulfide isome... 31 4.3
BC014433-1|AAH14433.1| 505|Homo sapiens protein disulfide isome... 31 4.3
AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide ... 31 4.3
AK092020-1|BAC03792.1| 633|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK001383-1|BAA91663.1| 596|Homo sapiens protein ( Homo sapiens ... 31 4.3
BC035558-1|AAH35558.1| 1025|Homo sapiens N-acetyltransferase 10 ... 30 5.7
BC020205-1|AAH20205.1| 554|Homo sapiens Unknown (protein for IM... 30 5.7
AK022241-1|BAB13995.1| 1025|Homo sapiens protein ( Homo sapiens ... 30 5.7
AK001636-1|BAA91800.1| 1011|Homo sapiens protein ( Homo sapiens ... 30 5.7
AB051496-1|BAB21800.1| 1028|Homo sapiens KIAA1709 protein protein. 30 5.7
>D86958-1|BAA13194.2| 1593|Homo sapiens KIAA0203 protein.
Length = 1593
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/107 (19%), Positives = 50/107 (46%)
Frame = -2
Query: 404 TMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRR 225
T+ + + + +L Y+G + + T E + +KK + L+ + + N + +
Sbjct: 860 TLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEVLQNKDNEFALVK 919
Query: 224 DEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQNL 84
EK V ++NE++ + L+ HS + + E + + +L++L
Sbjct: 920 HEKEAVICLQNEKDQKLLEMEN--IMHSQNCEIKELKQSREIVLEDL 964
>BC017556-1|AAH17556.1| 1594|Homo sapiens RB1-inducible coiled-coil 1
protein.
Length = 1594
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/107 (19%), Positives = 50/107 (46%)
Frame = -2
Query: 404 TMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRR 225
T+ + + + +L Y+G + + T E + +KK + L+ + + N + +
Sbjct: 858 TLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEVLQNKDNEFALVK 917
Query: 224 DEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQNL 84
EK V ++NE++ + L+ HS + + E + + +L++L
Sbjct: 918 HEKEAVICLQNEKDQKLLEMEN--IMHSQNCEIKELKQSREIVLEDL 962
>AB059622-1|BAB69690.1| 1594|Homo sapiens Rb1-inducible coiled coil
protein protein.
Length = 1594
Score = 31.1 bits (67), Expect = 3.3
Identities = 21/107 (19%), Positives = 50/107 (46%)
Frame = -2
Query: 404 TMSRERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFYKYISICKNGVMVRR 225
T+ + + + +L Y+G + + T E + +KK + L+ + + N + +
Sbjct: 858 TLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEVLQNKDNEFALVK 917
Query: 224 DEKSRVFIVKNEQNIEYLKANKYYAFHSDSVDNFEFENDSKKMLQNL 84
EK V ++NE++ + L+ HS + + E + + +L++L
Sbjct: 918 HEKEAVICLQNEKDQKLLEMEN--IMHSQNCEIKELKQSREIVLEDL 962
>Z49835-1|CAA89996.1| 505|Homo sapiens protein disulfide isomerase
protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>U75885-1|AAC51518.1| 505|Homo sapiens ER-60 protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>U42068-1|AAC50331.1| 505|Homo sapiens P58 protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>D83485-1|BAA11928.1| 505|Homo sapiens ER-60 protease protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>D16234-1|BAA03759.1| 505|Homo sapiens phospholipase C-alpha
protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSDPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein.
Length = 1235
Score = 30.7 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 608 LECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESS 465
L C+ LT++V YG + +K+ R + L + + N+NFK +E S
Sbjct: 499 LLCETLTETV--YGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 544
>BC071878-1|AAH71878.1| 505|Homo sapiens protein disulfide
isomerase family A, member 3 protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>BC065561-1|AAH65561.1| 832|Homo sapiens ARHGEF10L protein protein.
Length = 832
Score = 30.7 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 608 LECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESS 465
L C+ LT++V YG + +K+ R + L + + N+NFK +E S
Sbjct: 96 LLCETLTETV--YGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 141
>BC036000-1|AAH36000.4| 505|Homo sapiens protein disulfide
isomerase family A, member 3 protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>BC014433-1|AAH14433.1| 505|Homo sapiens protein disulfide
isomerase family A, member 3 protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAATAEQKLLLKKTRDALLPFY-KYISICKN 243
+R LK+ + + DGPVK+ VA ++ ++ + +D L+ FY + CKN
Sbjct: 362 KRYLKSEPIPESNDGPVKVVVAENFDE-IVNNENKDVLIEFYAPWCGHCKN 411
>AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1052
Score = 30.7 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 608 LECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESS 465
L C+ LT++V YG + +K+ R + L + + N+NFK +E S
Sbjct: 316 LLCETLTETV--YGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 361
>AK092020-1|BAC03792.1| 633|Homo sapiens protein ( Homo sapiens
cDNA FLJ34701 fis, clone MESAN2002724, weakly similar to
Rho guanine nucleotide exchange factor (GEF) 10. ).
Length = 633
Score = 30.7 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 608 LECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESS 465
L C+ LT++V YG + +K+ R + L + + N+NFK +E S
Sbjct: 246 LLCETLTETV--YGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 291
>AK001383-1|BAA91663.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ10521 fis, clone NT2RP2000841. ).
Length = 596
Score = 30.7 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 608 LECDNLTDSVEIYGIHDNRLNNKKIRNYYLKKICILLNLNFKHVIESS 465
L C+ LT++V YG + +K+ R + L + + N+NFK +E S
Sbjct: 67 LLCETLTETV--YGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 112
>BC035558-1|AAH35558.1| 1025|Homo sapiens N-acetyltransferase 10
protein.
Length = 1025
Score = 30.3 bits (65), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAAT 321
++++KN LNI D P ++F+AAT
Sbjct: 77 QKKIKNGTLNIKQDDPFELFIAAT 100
>BC020205-1|AAH20205.1| 554|Homo sapiens Unknown (protein for
IMAGE:4857480) protein.
Length = 554
Score = 30.3 bits (65), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAAT 321
++++KN LNI D P ++F+AAT
Sbjct: 77 QKKIKNGTLNIKQDDPFELFIAAT 100
>AK022241-1|BAB13995.1| 1025|Homo sapiens protein ( Homo sapiens
cDNA FLJ12179 fis, clone MAMMA1000738, moderately
similar to HYPOTHETICAL 116.5 KD PROTEIN C20G8.09C IN
CHROMOSOME I. ).
Length = 1025
Score = 30.3 bits (65), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAAT 321
++++KN LNI D P ++F+AAT
Sbjct: 77 QKKIKNGTLNIKQDDPFELFIAAT 100
>AK001636-1|BAA91800.1| 1011|Homo sapiens protein ( Homo sapiens
cDNA FLJ10774 fis, clone NT2RP4000290. ).
Length = 1011
Score = 30.3 bits (65), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAAT 321
++++KN LNI D P ++F+AAT
Sbjct: 77 QKKIKNGTLNIKQDDPFELFIAAT 100
>AB051496-1|BAB21800.1| 1028|Homo sapiens KIAA1709 protein protein.
Length = 1028
Score = 30.3 bits (65), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 392 ERRLKNFNLNINYDGPVKIFVAAT 321
++++KN LNI D P ++F+AAT
Sbjct: 80 QKKIKNGTLNIKQDDPFELFIAAT 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,637,755
Number of Sequences: 237096
Number of extensions: 1119290
Number of successful extensions: 2263
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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