Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15d08
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    26   0.83 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.4  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   5.9  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    23   5.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   7.8  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 26.2 bits (55), Expect = 0.83
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 335 KFALVSTAVCLFLLAGIAALSLEDDDVDRSAIFLPI 442
           +F  + T + L +L      SLED DVDR  +  PI
Sbjct: 445 RFGKLQTCLGLAMLLKSYTFSLEDCDVDRPLLIDPI 480


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 264 TFNNNVAPLLSSIYDEV 214
           +F + + PLLSSI DEV
Sbjct: 219 SFASTITPLLSSISDEV 235


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 387 LRCRLKTTMSIGRPFFYPSFQC 452
           L C L  ++S+  P F P +QC
Sbjct: 41  LHCSLSLSLSLLSPSFSPIWQC 62


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 207 RDFITKNMAKFKTVALKLPVAPSTTEYVPTSISG 106
           RDF+ +N+ K   + LK  +A  TT+ + T   G
Sbjct: 160 RDFMEENVQKHGEMELKDVMARFTTDVIGTCAFG 193


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 164 RSSCPLHRLLQNTCPLR 114
           ++ CP+HR+   TC L+
Sbjct: 403 QNQCPIHRIQHCTCMLQ 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,751
Number of Sequences: 2352
Number of extensions: 12288
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)