Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15d04
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.38 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.7  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    23   8.2  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   8.2  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = -2

Query: 511  QNCTNARINISRSNKRVASYNVNMLKSELEENDMSDNKFIVQFK 380
            + CTNA +++  +     S++ N+LK+ +  ND++DN  + + K
Sbjct: 1474 EECTNANLSLDTT-----SHSGNLLKATVYINDINDNSPVFESK 1512


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 235  ISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDEDENDYTF 107
            ++ LLE+++ KV   V ++NG N   N L  +    D +  T+
Sbjct: 990  LTALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATY 1032


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 509 KLHKRKNQH*SIEQTRCFVQC 447
           K+H R N+      T CFV+C
Sbjct: 32  KVHYRANEFPDDPVTHCFVRC 52


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 509 KLHKRKNQH*SIEQTRCFVQC 447
           K+H R N+      T CFV+C
Sbjct: 45  KVHYRANEFPDDPVTHCFVRC 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,520
Number of Sequences: 2352
Number of extensions: 9566
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)