Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d02
(299 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 1.2
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 1.2
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 1.6
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 2.9
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 20 5.0
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 20 5.0
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 20 5.0
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 20 5.0
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 20 5.0
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 20 5.0
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 19 8.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 19 8.7
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 19 8.7
AY052623-1|AAL15471.1| 101|Tribolium castaneum kynurenine 3-mon... 19 8.7
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 19 8.7
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 19 8.7
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 19 8.7
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 19 8.7
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.2 bits (45), Expect = 1.2
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 290 FSVNFCIGEVYQNGQTYQKGWN--YWQ 216
F+ N+ + Y N YQ+G++ Y+Q
Sbjct: 211 FNFNYQYNQAYSNYNNYQEGFSCQYYQ 237
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 1.2
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 290 FSVNFCIGEVYQNGQTYQKGWN--YWQ 216
F+ N+ + Y N YQ+G++ Y+Q
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGFSCQYYQ 257
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.8 bits (44), Expect = 1.6
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -2
Query: 217 KYGTR-YGASLRKMVKKMEVTQHAKYTCSFCGK 122
KY R + S ++ + T Y+C CGK
Sbjct: 83 KYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.0 bits (42), Expect = 2.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 235 FWYVWPFW*TSPIQKLTEK 291
FW++W TS ++K +K
Sbjct: 411 FWFMWKAKGTSGLEKHVDK 429
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 20.2 bits (40), Expect = 5.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 186 VKWSKRWK*PNTQSI 142
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 20.2 bits (40), Expect = 5.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 286 LSTFVSERFTKMAKRTKKV 230
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 20.2 bits (40), Expect = 5.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 286 LSTFVSERFTKMAKRTKKV 230
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 20.2 bits (40), Expect = 5.0
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 119 ILTTK*ASILCVLGYFHLFDHFT*RGTVTCAIFASNSNL 235
I T +LC+ +F F FT CA N +L
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHL 193
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 20.2 bits (40), Expect = 5.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 286 LSTFVSERFTKMAKRTKKV 230
LST ++ RFT++ RT+ +
Sbjct: 237 LSTALAYRFTQVTDRTQSM 255
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 20.2 bits (40), Expect = 5.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 186 VKWSKRWK*PNTQSI 142
+KW K K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 19.4 bits (38), Expect = 8.7
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = -2
Query: 154 HAKYTCSFCG 125
H +TC+ CG
Sbjct: 496 HNPFTCNMCG 505
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 19.4 bits (38), Expect = 8.7
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = +3
Query: 45 TQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFAC 155
T PPA V+ + P + P N Y+ C
Sbjct: 1085 TIPPPAVVMPEVDKPSQPCEPGQYVPDPHNCNAYYRC 1121
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 121 PYHKMSKYTLRVGLLPSF*PFY 186
PYH SK+ L + PFY
Sbjct: 58 PYHVGSKFLLIGDAAHAMVPFY 79
>AY052623-1|AAL15471.1| 101|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 101
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 121 PYHKMSKYTLRVGLLPSF*PFY 186
PYH SK+ L + PFY
Sbjct: 73 PYHVGSKFLLIGDAAHAMVPFY 94
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 121 PYHKMSKYTLRVGLLPSF*PFY 186
PYH SK+ L + PFY
Sbjct: 291 PYHVGSKFLLIGDAAHAMVPFY 312
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 121 PYHKMSKYTLRVGLLPSF*PFY 186
PYH SK+ L + PFY
Sbjct: 291 PYHVGSKFLLIGDAAHAMVPFY 312
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 19.4 bits (38), Expect = 8.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 98 DTRTFHSILTTK*ASILCVLGYF 166
DTR+ HS+ K +L +F
Sbjct: 10 DTRSTHSMKNFKYLKVLVTFAHF 32
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 19.4 bits (38), Expect = 8.7
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 288 LCQLLYRRGLPKWPNVPKRLELLANMAHVTVPLYVKWSKRWK 163
LC+LL NVP + ++ A+V RWK
Sbjct: 423 LCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVINRWK 464
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,497
Number of Sequences: 336
Number of extensions: 1851
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 5429307
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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