Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15c23
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p pro...   281   4e-76
AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,...   281   4e-76
AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,...   281   4e-76
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro...    30   2.3  
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P...    30   2.3  
BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p pro...    29   4.0  
AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p pro...    29   4.0  
AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,...    29   4.0  
AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,...    29   4.0  
AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,...    29   4.0  
AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,...    29   4.0  
AE014134-603|AAF51108.2|  206|Drosophila melanogaster CG12795-PA...    29   5.3  
AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-P...    29   5.3  
AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-P...    29   5.3  
AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.    29   5.3  

>AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p
           protein.
          Length = 337

 Score =  281 bits (690), Expect = 4e-76
 Identities = 132/210 (62%), Positives = 171/210 (81%)
 Frame = -2

Query: 636 ESVVVILRYKEISQRILDLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVI 457
           ESVVV+   ++ S+  L LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF E+PIVI
Sbjct: 126 ESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVI 185

Query: 456 RNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQ 277
           +NSPLTNIM+SEL E++PE++G  FLDLGTA+VLE Q+RSL+ERVDEL QEA+++N+YQQ
Sbjct: 186 KNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQ 245

Query: 276 LVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDT 97
           +V +Q  +KHR + K A ENA R +K E  +PEE+V K F+P   P RL   I +GQI+T
Sbjct: 246 VVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQFRPMTAPNRLTATITSGQINT 305

Query: 96  YSQHISQFCSQSLAKLYLTQALQNAKEAKQ 7
           ++QHI+QFCSQSLAKL++T++LQ AKEAK+
Sbjct: 306 HAQHIAQFCSQSLAKLFITESLQIAKEAKE 335


>AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,
           isoform B protein.
          Length = 338

 Score =  281 bits (690), Expect = 4e-76
 Identities = 132/210 (62%), Positives = 171/210 (81%)
 Frame = -2

Query: 636 ESVVVILRYKEISQRILDLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVI 457
           ESVVV+   ++ S+  L LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF E+PIVI
Sbjct: 127 ESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVI 186

Query: 456 RNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQ 277
           +NSPLTNIM+SEL E++PE++G  FLDLGTA+VLE Q+RSL+ERVDEL QEA+++N+YQQ
Sbjct: 187 KNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQ 246

Query: 276 LVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDT 97
           +V +Q  +KHR + K A ENA R +K E  +PEE+V K F+P   P RL   I +GQI+T
Sbjct: 247 VVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQFRPMTAPNRLTATITSGQINT 306

Query: 96  YSQHISQFCSQSLAKLYLTQALQNAKEAKQ 7
           ++QHI+QFCSQSLAKL++T++LQ AKEAK+
Sbjct: 307 HAQHIAQFCSQSLAKLFITESLQIAKEAKE 336


>AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,
           isoform A protein.
          Length = 338

 Score =  281 bits (690), Expect = 4e-76
 Identities = 132/210 (62%), Positives = 171/210 (81%)
 Frame = -2

Query: 636 ESVVVILRYKEISQRILDLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENLFIEVPIVI 457
           ESVVV+   ++ S+  L LKAYRLTPQAI MYK+GD+TPEA R LK+GYENLF E+PIVI
Sbjct: 127 ESVVVVYDTQKSSRGFLCLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVI 186

Query: 456 RNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQ 277
           +NSPLTNIM+SEL E++PE++G  FLDLGTA+VLE Q+RSL+ERVDEL QEA+++N+YQQ
Sbjct: 187 KNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQ 246

Query: 276 LVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDT 97
           +V +Q  +KHR + K A ENA R +K E  +PEE+V K F+P   P RL   I +GQI+T
Sbjct: 247 VVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQFRPMTAPNRLTATITSGQINT 306

Query: 96  YSQHISQFCSQSLAKLYLTQALQNAKEAKQ 7
           ++QHI+QFCSQSLAKL++T++LQ AKEAK+
Sbjct: 307 HAQHIAQFCSQSLAKLFITESLQIAKEAKE 336


>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p protein.
          Length = 1051

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
 Frame = -2

Query: 414  EMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWM- 238
            E I EEE  +  +L  A +LE Q+R    + +   +E IK  ++++  +R+++ +   + 
Sbjct: 809  ERIREEEQFREAELREARILEEQIREQQIKEELFREEQIKEEQFREEQLREEEVRREQLR 868

Query: 237  ---VKRAQENAAR---------AAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDTY 94
               ++R Q    R         + KD++P P    N ++     PP+    ++    D Y
Sbjct: 869  EEEIQRQQAQILRIREAQYSEQSFKDDSPAP----NAVY-DDAAPPQRGARVIFP--DHY 921

Query: 93   SQHI 82
             QHI
Sbjct: 922  EQHI 925


>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
            protein.
          Length = 1051

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
 Frame = -2

Query: 414  EMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWM- 238
            E I EEE  +  +L  A +LE Q+R    + +   +E IK  ++++  +R+++ +   + 
Sbjct: 809  ERIREEEQFREAELREARILEEQIREQQIKEELFREEQIKEEQFREEQLREEEVRREQLR 868

Query: 237  ---VKRAQENAAR---------AAKDETPLPEEDVNKLFKPHPVPPRLNPMIVAGQIDTY 94
               ++R Q    R         + KD++P P    N ++     PP+    ++    D Y
Sbjct: 869  EEEIQRQQAQILRIREAQYSEQSFKDDSPAP----NAVY-DDAAPPQRGARVIFP--DHY 921

Query: 93   SQHI 82
             QHI
Sbjct: 922  EQHI 925


>BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p
           protein.
          Length = 943

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 837 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 877


>AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p
           protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 663 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 703


>AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,
           isoform B protein.
          Length = 878

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 833 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 873


>AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,
           isoform D protein.
          Length = 943

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 837 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 877


>AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,
           isoform C protein.
          Length = 943

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 837 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 877


>AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,
           isoform A protein.
          Length = 943

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 330 ERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAAR 208
           E+VDE+ +E   FN Y +   R Q  +H    KR +  +AR
Sbjct: 837 EKVDEVRKEVQYFNNYLRDPKRPQLPEHPGTSKRPESESAR 877


>AE014134-603|AAF51108.2|  206|Drosophila melanogaster CG12795-PA
           protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 156 KPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLAKLYLTQALQNAKEAKQ 7
           +P P PP + P +  GQ      HI Q C     K+Y  +   NAK  K+
Sbjct: 62  EPVPTPPGVEPDVTVGQ------HIDQQCKSESKKIYTNRC--NAKGCKR 103


>AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-PA
           protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = -2

Query: 345 LRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDVN 166
           + S   ++D  +   ++ ++ +Q +  +QQ +HR  + R+         D   LP++D +
Sbjct: 1   MTSTSTKIDRESSTRLRLDKMEQPMDARQQQRHRRRLGRSHREPTPVTGD--ALPQDDAS 58

Query: 165 KLFKPHPVPPRLNPMI 118
               P P P  +   I
Sbjct: 59  PDALPDPSPQMVRMQI 74


>AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-PA,
            isoform A protein.
          Length = 2376

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = -2

Query: 360  VLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKR--AQENAARAAKDETP 187
            +LEGQ  + + ++    +E  KF+  +QL    Q ++H    +R  A +NA  +A  +T 
Sbjct: 1746 ILEGQAEANLRQLPRHLREFAKFSTSEQLPDGAQMERHEEQERREEATDNAHSSATKKT- 1804

Query: 186  LPEEDVNKLFKPHPVPP 136
                 + K +K   +PP
Sbjct: 1805 ----SIVKTYKVSRLPP 1817


>AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.
          Length = 2376

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = -2

Query: 360  VLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKR--AQENAARAAKDETP 187
            +LEGQ  + + ++    +E  KF+  +QL    Q ++H    +R  A +NA  +A  +T 
Sbjct: 1746 ILEGQAEANLRQLPRHLREFAKFSTSEQLPDGAQMERHEEQERREEATDNAHSSATKKT- 1804

Query: 186  LPEEDVNKLFKPHPVPP 136
                 + K +K   +PP
Sbjct: 1805 ----SIVKTYKVSRLPP 1817


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,659,793
Number of Sequences: 53049
Number of extensions: 594497
Number of successful extensions: 1887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)