Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15c14
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    27   0.60 
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   4.3  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   4.3  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   4.3  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    23   5.6  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   7.4  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   7.4  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    23   7.4  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.8  

>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -2

Query: 209 KKRIITLRKSLRVHTKR--AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKK 48
           KK++  L + +    +R  A +EKIN  FI   S+ G+   + P D       LKK
Sbjct: 53  KKKVFKLARLIPAVRRRVDAEIEKINAGFIKDISQTGNYYTELPHDSMGQAEILKK 108


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 149 EKINLKFIDTSSKFGH-GRFQTPADKAAFMG 60
           EKI       S  FG   R+QTPAD    MG
Sbjct: 288 EKIKAGKSKLSDYFGEFNRYQTPADAVCEMG 318


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 129 H*HLVQVRSWSIPDAG*QG-CIHGYTQEGSYSRRSCGYHNPSG 4
           H H  +    S  DA  Q  C   Y  EGSYS + CG    SG
Sbjct: 56  HLHQTRTAQESPYDASIQAACKQIY--EGSYSSKDCGTKGTSG 96


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 129 H*HLVQVRSWSIPDAG*QG-CIHGYTQEGSYSRRSCGYHNPSG 4
           H H  +    S  DA  Q  C   Y  EGSYS + CG    SG
Sbjct: 56  HLHQTRTAQESPYDASIQAACKQIY--EGSYSSKDCGTKGTSG 96


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 377 YRIGQGIHKKDGKVIKNNASTEYDL 303
           YR+  G+H  D  +I+  A  EY++
Sbjct: 203 YRVNAGVHVNDIVLIELAADVEYNV 227


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 34  SRIRSFLSVPMNAALSAGVWNRP*PNLDEVSMNLRLIFSSAA 159
           S+ R  ++VP  +   AG  +   P+L E++ +L+L+    A
Sbjct: 109 SQQREEMTVPATSTPKAGKCSSAEPSLSEMNESLKLLAMQVA 150


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 152 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 30
           ++ IN++ I T+       +Q    KA      +KD+IREE
Sbjct: 76  VDDINVEQISTNQAGYDQAYQEAIAKAVTACMAQKDKIREE 116


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 152 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 30
           ++ IN++ I T+       +Q    KA      +KD+IREE
Sbjct: 225 VDDINVEQISTNQAGYDQAYQEAIAKAVTACMAQKDKIREE 265


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 334 ITLPSFLWIPCPIR*IFLFI 393
           I +PS   +P P+R +FL +
Sbjct: 268 IPMPSITEVPIPVRFLFLLL 287


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,492
Number of Sequences: 2352
Number of extensions: 14440
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)