Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15c07
(563 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p pro... 31 0.81
AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-P... 31 0.81
AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA... 30 1.9
AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p pro... 30 2.5
AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p pro... 30 2.5
U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein. 28 7.6
BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p pro... 28 7.6
BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p pro... 28 7.6
AY069456-1|AAL39601.1| 564|Drosophila melanogaster LD18112p pro... 28 7.6
AE014134-2170|AAF53173.4| 475|Drosophila melanogaster CG17213-P... 28 7.6
AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC... 28 7.6
AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD... 28 7.6
AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE... 28 7.6
AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB... 28 7.6
AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA... 28 7.6
AE013599-20|EAA45987.2| 575|Drosophila melanogaster CG17486-PA ... 28 7.6
>AY089288-1|AAL90026.1| 598|Drosophila melanogaster AT08391p
protein.
Length = 598
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 264 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 91
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 90 -VIDVD 76
++D+D
Sbjct: 322 EILDLD 327
>AE014296-3315|AAF49042.1| 598|Drosophila melanogaster CG17122-PA
protein.
Length = 598
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 264 KLAFVLGQERHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR- 91
K+ + G R++ K K ++ +EVL Y + + L A +C N K D K+R +AKR
Sbjct: 265 KIKIIEGLTRNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRM 321
Query: 90 -VIDVD 76
++D+D
Sbjct: 322 EILDLD 327
>AE014297-1358|AAF54682.3| 895|Drosophila melanogaster CG6834-PA
protein.
Length = 895
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 49 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 228
+LF I++++H+DY YF F+ E L+ + H++ H S A
Sbjct: 349 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLDLLGFTGKQPSLRELHMLMYKHGSWA 408
>AY113442-1|AAM29447.1| 803|Drosophila melanogaster RE28849p
protein.
Length = 803
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 49 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 228
+LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
>AY071446-1|AAL49068.1| 803|Drosophila melanogaster RE52979p
protein.
Length = 803
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 49 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 228
+LF I++++H+DY YF F+ E L + H++ H S A
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316
>U35621-1|AAB82065.1| 1148|Drosophila melanogaster CNN protein.
Length = 1148
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 366 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>BT021269-1|AAX33417.1| 1130|Drosophila melanogaster RE46972p
protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 348 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>BT010053-1|AAQ22522.1| 1148|Drosophila melanogaster LD19135p
protein.
Length = 1148
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 366 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>AY069456-1|AAL39601.1| 564|Drosophila melanogaster LD18112p
protein.
Length = 564
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 281 RSENMAKCWCLVMSRGNVTVPFLLSVTMAVFNFSADCSMLSLASSSFKRNSNCSNLLPTS 460
R NMA L M + N++ P + +F+ DC++L+L ++ F + L+ +
Sbjct: 274 RVRNMAPFCRLCMQKLNISPPCRHAKLCILFSGGLDCTILALLANQFVPVNEPIELINVA 333
Query: 461 FLNVSWVTIN 490
F +V I+
Sbjct: 334 FESVKGQNIS 343
>AE014134-2170|AAF53173.4| 475|Drosophila melanogaster CG17213-PA
protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 444 FEQFELRLNELDAKLNMLQSAEKLKTAIVTESKN 343
F+QF+ RLN++DA + Q ++ VT K+
Sbjct: 95 FQQFDARLNDIDAVIQKCQRVAEMDKVKVTAVKH 128
>AE013599-1716|AAF58376.2| 1320|Drosophila melanogaster CG4832-PC,
isoform C protein.
Length = 1320
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 538 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 585
>AE013599-1715|AAX52706.1| 1090|Drosophila melanogaster CG4832-PD,
isoform D protein.
Length = 1090
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 308 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 355
>AE013599-1714|ABC66061.1| 1130|Drosophila melanogaster CG4832-PE,
isoform E protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 348 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 395
>AE013599-1713|AAM68579.1| 1120|Drosophila melanogaster CG4832-PB,
isoform B protein.
Length = 1120
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 338 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 385
>AE013599-1712|AAF58375.1| 1148|Drosophila melanogaster CG4832-PA,
isoform A protein.
Length = 1148
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 504 TNSEKFMVTHETFKNDVGNRFE-QFELRLNELDAKLNMLQSAEKLKTA 364
++S + M +E ++ ++EL++NE + K+ LQ+ K KTA
Sbjct: 366 SSSGRSMSDNEASSQEMSTNLRVRYELKINEQEEKIKQLQTEVKKKTA 413
>AE013599-20|EAA45987.2| 575|Drosophila melanogaster CG17486-PA
protein.
Length = 575
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 281 RSENMAKCWCLVMSRGNVTVPFLLSVTMAVFNFSADCSMLSLASSSFKRNSNCSNLLPTS 460
R NMA L M + N++ P + +F+ DC++L+L ++ F + L+ +
Sbjct: 285 RVRNMAPFCRLCMQKLNISPPCRHAKLCILFSGGLDCTILALLANQFVPVNEPIELINVA 344
Query: 461 FLNVSWVTIN 490
F +V I+
Sbjct: 345 FESVKGQNIS 354
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,558,874
Number of Sequences: 53049
Number of extensions: 509517
Number of successful extensions: 1406
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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