Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15c02
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2735|AAZ52804.1| 180|Drosophila melanogaster CG33724-P... 31 1.2
BT012483-1|AAS93754.1| 326|Drosophila melanogaster LD45673p pro... 30 2.2
AE014296-3442|AAF51653.2| 445|Drosophila melanogaster CG11456-P... 30 2.2
AY051552-1|AAK92976.1| 418|Drosophila melanogaster GH20109p pro... 29 3.8
AE014296-1259|AAF50560.2| 418|Drosophila melanogaster CG8560-PA... 29 3.8
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 6.6
AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA ... 28 8.8
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P... 28 8.8
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P... 28 8.8
>AE013599-2735|AAZ52804.1| 180|Drosophila melanogaster CG33724-PA
protein.
Length = 180
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/96 (26%), Positives = 38/96 (39%)
Frame = -3
Query: 554 NTLALKSINFLNM*YFNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQ 375
N A K F N Y +F ++ TT +C + R T +G + +
Sbjct: 90 NAAASKPCEFFNRYYISFFLVKSTESNLPTTGAEMCPF--RKGTYFVKNGVV-----STE 142
Query: 374 CWATCVCLATNRQCIRFLKNGFCCHTTKWSLSKANL 267
W V NR I +LKNG C + ++S A +
Sbjct: 143 DWPPIVFKGLNRFTISYLKNGECVGGVQLTISIAEI 178
>BT012483-1|AAS93754.1| 326|Drosophila melanogaster LD45673p
protein.
Length = 326
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 209 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 33
K FKF+ M +C K +F SC +E+ RC +WKA + + V P
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163
Query: 32 FEKN 21
FE N
Sbjct: 164 FECN 167
>AE014296-3442|AAF51653.2| 445|Drosophila melanogaster CG11456-PA
protein.
Length = 445
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 209 KRSKFKFEIRLCMTACRNCTKWVAF*SCGRMAVEIM*HTRCETPIWKAILISLSAKV-PP 33
K FKF+ M +C K +F SC +E+ RC +WKA + + V P
Sbjct: 105 KECPFKFQDATKMELHCSCHKGGSF-SCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPV 163
Query: 32 FEKN 21
FE N
Sbjct: 164 FECN 167
>AY051552-1|AAK92976.1| 418|Drosophila melanogaster GH20109p
protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 111 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 200
Y HTTTR+ R + I ++C+ T N F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258
>AE014296-1259|AAF50560.2| 418|Drosophila melanogaster CG8560-PA
protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 111 YCHTTTRLKRNPFRAIPASCH-TQTNLEFEF 200
Y HTTTR+ R + I ++C+ T N F+F
Sbjct: 228 YSHTTTRMWRKTRKPISSACYGTDANRNFDF 258
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 68 PSKSASRIECAT*SLLPYDHKTKTQPISCNSCKLSYTNESRI*ICSSSVMRVLSKSNTTT 247
P+ + R T + P ++ +C SC + T S C+S +S TTT
Sbjct: 923 PTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTT 982
Query: 248 C 250
C
Sbjct: 983 C 983
>AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA
protein.
Length = 3115
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 585 FSFLSEYADLKYLGFEKYKFFEYVIFQF 502
FS L+E ADL+Y+ EK F+Y F
Sbjct: 1184 FSMLAERADLQYVTVEKAGLFDYTTNAF 1211
>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
isoform B protein.
Length = 2968
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 CKYLKRPPT-----TCATSGTILNAHSKRQCWATCVCLATNRQCIRFLKNG 312
C L R PT +C +S T+ A T C A N CI L+NG
Sbjct: 2776 CNELSRLPTEGECLSCDSSKTLECAQDPTAVLTTITCHAPNSDCITRLENG 2826
>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
isoform A protein.
Length = 2931
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 449 CKYLKRPPT-----TCATSGTILNAHSKRQCWATCVCLATNRQCIRFLKNG 312
C L R PT +C +S T+ A T C A N CI L+NG
Sbjct: 2739 CNELSRLPTEGECLSCDSSKTLECAQDPTAVLTTITCHAPNSDCITRLENG 2789
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,421,403
Number of Sequences: 53049
Number of extensions: 673531
Number of successful extensions: 1760
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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