Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15c02
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 1.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.5
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.5
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 5.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.6
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 266 KDSLLRETTL*CGNRNHSLRN 328
K SLL+E T+ C H L+N
Sbjct: 379 KQSLLKENTVTCQEAMHMLKN 399
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + C +P + + NNY Y
Sbjct: 49 SYKNEREYQKYRETSKERSRDRTERERCKEPKIISSLSNNYKY 91
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E + KY K + + + +P + + NNYNY
Sbjct: 49 SYKNENSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNYNY 91
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 236 NTTTCGNPHVKDSL 277
NT C NP+ +DSL
Sbjct: 106 NTKNCVNPYDRDSL 119
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 446 KYLKRPPTTCATSGTI 399
K + PP CA SG+I
Sbjct: 309 KSITEPPKNCADSGSI 324
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 299 CGNRNHSLRNEYIG 340
CGN +H N+++G
Sbjct: 1598 CGNFDHDSTNDFVG 1611
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 69 LPNRRLASSVLHDLYCHTTTRLK 137
L LAS V ++++C TT K
Sbjct: 149 LMGANLASEVANEMFCETTIGCK 171
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -2
Query: 582 SFLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNY 454
S+ +E KY K + + + +P + + NNYNY
Sbjct: 49 SYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNYNY 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,250
Number of Sequences: 438
Number of extensions: 4292
Number of successful extensions: 44
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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