Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15b14
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p pro...    29   4.3  
AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-P...    29   4.3  
BT016136-1|AAV37021.1|  693|Drosophila melanogaster GH01148p pro...    29   5.7  
AE014134-1346|AAF52562.2| 1052|Drosophila melanogaster CG7134-PA...    29   5.7  

>AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p
           protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -1

Query: 632 RHVRAICQRMQKSNHRIAPRGSR--ARVEYFERAMQRFLHRC*RK 504
           R+VR I       NH IA RGSR    +    RA  R  H C R+
Sbjct: 134 RYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHACARQ 178


>AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-PA
           protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -1

Query: 632 RHVRAICQRMQKSNHRIAPRGSR--ARVEYFERAMQRFLHRC*RK 504
           R+VR I       NH IA RGSR    +    RA  R  H C R+
Sbjct: 134 RYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHACARQ 178


>BT016136-1|AAV37021.1|  693|Drosophila melanogaster GH01148p
           protein.
          Length = 693

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 469 KMGRNTNMKKVNKIASTVLIGFYLRHYLESLPNKAY-PVAELELRNVCRFIMSKY 308
           K+   T+M    ++ +  LIG Y   YL   P +AY P+   E+    RF  + Y
Sbjct: 84  KIVHYTSMNPAKRLNAAYLIGSYAIIYLNKTPQEAYRPLVAGEIPAYTRFCDASY 138


>AE014134-1346|AAF52562.2| 1052|Drosophila melanogaster CG7134-PA
           protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 469 KMGRNTNMKKVNKIASTVLIGFYLRHYLESLPNKAY-PVAELELRNVCRFIMSKY 308
           K+   T+M    ++ +  LIG Y   YL   P +AY P+   E+    RF  + Y
Sbjct: 84  KIVHYTSMNPAKRLNAAYLIGSYAIIYLNKTPQEAYRPLVAGEIPAYTRFCDASY 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,551,710
Number of Sequences: 53049
Number of extensions: 605760
Number of successful extensions: 1682
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)