Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15b09
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P46599 Cluster: Serine/threonine-protein kinase STE7 ho...    36   0.56 
UniRef50_Q6BLD0 Cluster: Similar to ca|CA1623|CaSTE7 Candida alb...    36   0.98 
UniRef50_Q4R618 Cluster: Testis cDNA, clone: QtsA-19335, similar...    33   6.9  
UniRef50_Q8II67 Cluster: Putative uncharacterized protein; n=3; ...    33   6.9  

>UniRef50_P46599 Cluster: Serine/threonine-protein kinase STE7
           homolog; n=4; Saccharomycetales|Rep:
           Serine/threonine-protein kinase STE7 homolog - Candida
           albicans (Yeast)
          Length = 589

 Score = 36.3 bits (80), Expect = 0.56
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +1

Query: 340 CNCGGDPLGLIISICSNTEFQILKMMPLRAAVISGTSVNYVSTKCKVVRQNLK*IFDFAH 519
           CNCG   L  I+ +C N +F    +  L  A++SG  + Y+ T  K++ +++K       
Sbjct: 328 CNCGS--LDKILPLCENKQFPTFVLKKLSFAILSG--LTYLYTTHKIIHRDIK------P 377

Query: 520 KNIIVTH 540
            N+++TH
Sbjct: 378 NNVLMTH 384


>UniRef50_Q6BLD0 Cluster: Similar to ca|CA1623|CaSTE7 Candida
           albicans CaSTE7 MAP Kinase Kinase; n=2;
           Saccharomycetaceae|Rep: Similar to ca|CA1623|CaSTE7
           Candida albicans CaSTE7 MAP Kinase Kinase - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 504

 Score = 35.5 bits (78), Expect = 0.98
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +1

Query: 340 CNCGGDPLGLIISICSNTEFQILKMMPLRAAVISGTSVNYVSTKCKVVRQNLK 498
           CNCG   L  I+ +C N +F +  +  L  A++SG  + Y+ +  K++ +++K
Sbjct: 279 CNCGS--LDKILPLCQNNQFPLFVLKKLSYAILSG--LTYLYSTHKIIHRDIK 327


>UniRef50_Q4R618 Cluster: Testis cDNA, clone: QtsA-19335, similar to
           human hypothetical protein FLJ21439 (FLJ21439),; n=2;
           Euarchontoglires|Rep: Testis cDNA, clone: QtsA-19335,
           similar to human hypothetical protein FLJ21439
           (FLJ21439), - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 570

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -2

Query: 253 GFVIIMLISTKHLISEGPRARLLV*NC*VLKNRFCEEFHILLTCEGLK 110
           G ++ + +  +HL S+GP  + L   C +LK+      HI++TC  ++
Sbjct: 266 GKLLQLFVEREHLFSDGPDVKKLYVLCQILKDTSIAINHIIITCYSIE 313


>UniRef50_Q8II67 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1338

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 288 YIKPKPRLLIGSWKKMCVQLWRRPTWSHNQYMFKYRIPNFKND----AFESGS-YFGN 446
           Y   K ++ IG WK  CV       W  N+  F Y + N K       ++ G  YFGN
Sbjct: 298 YFFNKYKIYIGKWKSNCVDGKCEIIWKDNRQFFGYHLNNLKQGLGIYKWDDGRIYFGN 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,211,704
Number of Sequences: 1657284
Number of extensions: 10723429
Number of successful extensions: 19703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19703
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)