Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15b09
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.0  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    23   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.6  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   6.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.1  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 387 KYRIPNFKNDAFESGSYFGN 446
           +  IPNF   AFES S  GN
Sbjct: 76  RQHIPNFIAAAFESNSRGGN 95


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 387 KYRIPNFKNDAFESGSYFGN 446
           +  IPNF   AFES S  GN
Sbjct: 16  RQHIPNFIAAAFESNSRGGN 35


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 567 FRLIVFGSCMSYYDIFMGKIKYL 499
           F  IVF  C  YY I +  I  L
Sbjct: 546 FNTIVFAFCYCYYSISIRPISTL 568



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 567 FRLIVFGSCMSYYDIFMGK 511
           F  IVF  C  YY+  M K
Sbjct: 265 FNTIVFSFCYCYYNSKMTK 283


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 130 LTCEGLKLGKNSYT 89
           +TC GLKL K++ T
Sbjct: 91  VTCNGLKLPKSTIT 104


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = +1

Query: 4   LVQHSYFTCCNIVLQRLSGLLK 69
           +++  + TC +++LQR++ + K
Sbjct: 169 IIKIQFATCAHLILQRVNHVKK 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,755
Number of Sequences: 336
Number of extensions: 3077
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)