Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15b08
(663 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003786-1|AAO41469.1| 441|Drosophila melanogaster LD11194p pro... 32 0.80
BT001902-1|AAN71691.1| 678|Drosophila melanogaster SD21996p pro... 32 0.80
AY060262-1|AAL25301.1| 441|Drosophila melanogaster GH09289p pro... 32 0.80
AE014297-2000|AAN13651.2| 441|Drosophila melanogaster CG4898-PI... 32 0.80
AE014297-1999|AAN13650.1| 441|Drosophila melanogaster CG4898-PC... 32 0.80
AE014297-1998|AAN13649.2| 678|Drosophila melanogaster CG4898-PH... 32 0.80
AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA... 31 1.8
BT021334-1|AAX33482.1| 519|Drosophila melanogaster RE02462p pro... 29 5.6
AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-P... 29 5.6
AY119641-1|AAM50295.1| 581|Drosophila melanogaster RE44178p pro... 29 7.5
AE014298-105|AAF45547.1| 581|Drosophila melanogaster CG16785-PA... 29 7.5
>BT003786-1|AAO41469.1| 441|Drosophila melanogaster LD11194p
protein.
Length = 441
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 378 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 415
>BT001902-1|AAN71691.1| 678|Drosophila melanogaster SD21996p
protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 615 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 652
>AY060262-1|AAL25301.1| 441|Drosophila melanogaster GH09289p
protein.
Length = 441
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 378 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 415
>AE014297-2000|AAN13651.2| 441|Drosophila melanogaster CG4898-PI,
isoform I protein.
Length = 441
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 378 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 415
>AE014297-1999|AAN13650.1| 441|Drosophila melanogaster CG4898-PC,
isoform C protein.
Length = 441
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 378 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 415
>AE014297-1998|AAN13649.2| 678|Drosophila melanogaster CG4898-PH,
isoform H protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.80
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -1
Query: 390 SRNKNNSQSCNIPNSKYQLANKASSYGANNGIKSITIA 277
S N NNS S NI SK + N + G NN S TIA
Sbjct: 615 SNNNNNSNSNNIEISKSESCNASDIGGTNNNNASRTIA 652
>AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA
protein.
Length = 537
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 315 MRMLCLLTGTCYSEYCSSENCFYFGICRYIASY 413
M L + CYS CS+ NC Y+ +Y + Y
Sbjct: 491 MGNLSTCSSYCYSYKCSTHNCVYYDQAQYCSQY 523
>BT021334-1|AAX33482.1| 519|Drosophila melanogaster RE02462p
protein.
Length = 519
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 76 FEHRFQRCLSDWVKISFFI 132
FE+ F+R L DWV + FF+
Sbjct: 326 FEYSFERALDDWVFMCFFV 344
>AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-PA
protein.
Length = 908
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 76 FEHRFQRCLSDWVKISFFI 132
FE+ F+R L DWV + FF+
Sbjct: 326 FEYSFERALDDWVFMCFFV 344
>AY119641-1|AAM50295.1| 581|Drosophila melanogaster RE44178p
protein.
Length = 581
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Frame = +3
Query: 306 WRHMRMLCLLTGTCYSEY--------CSSENCFYFGICRYIASY 413
WR MR CLLT C + Y C++ F +C Y++S+
Sbjct: 304 WRLMRPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSH 347
>AE014298-105|AAF45547.1| 581|Drosophila melanogaster CG16785-PA
protein.
Length = 581
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Frame = +3
Query: 306 WRHMRMLCLLTGTCYSEY--------CSSENCFYFGICRYIASY 413
WR MR CLLT C + Y C++ F +C Y++S+
Sbjct: 304 WRLMRPGCLLTPPCLASYITTSYLSLCAASWWLIFALCFYLSSH 347
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,888,074
Number of Sequences: 53049
Number of extensions: 463913
Number of successful extensions: 882
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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