Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15b07
(689 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 3.1
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.1
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.1
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 4.1
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 4.1
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 4.1
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 7.2
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 7.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 7.2
AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochr... 21 7.2
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 9.5
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 21 9.5
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 21 9.5
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 21 9.5
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 207 EHERQMDRCVTPSTVQINLYDDNEDYL 127
+ E+ M+ +TP DDN+D+L
Sbjct: 121 KEEKDMETTLTPCASPNRKPDDNQDHL 147
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 81 NRCPDLQIDVYLXRQ 37
N CPD+ IDV+ R+
Sbjct: 322 NPCPDIIIDVHGTRR 336
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 625 NNNCTQMILALQFISKF 675
NN ILAL+FI K+
Sbjct: 166 NNGLKDQILALKFIKKY 182
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 625 NNNCTQMILALQFISKF 675
NN ILAL+FI K+
Sbjct: 166 NNGLKDQILALKFIKKY 182
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 625 NNNCTQMILALQFISKF 675
NN ILAL+FI K+
Sbjct: 166 NNGLKDQILALKFIKKY 182
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 625 NNNCTQMILALQFISKF 675
NN ILAL+FI K+
Sbjct: 166 NNGLKDQILALKFIKKY 182
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 625 NNNCTQMILALQFISKF 675
NN ILAL+FI K+
Sbjct: 166 NNGLKDQILALKFIKKY 182
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 582 RLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNN 469
R+P + +DT+ Q+L P + +V + + R+++ N
Sbjct: 645 RMPRDGVDTLQQFLTP--NMRVQEVVIQFSNRIVKPRN 680
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 254 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 352
+FS+ V + ++ R S+ LLKN L+ P+E
Sbjct: 73 RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 254 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 352
+FS+ V + ++ R S+ LLKN L+ P+E
Sbjct: 73 RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107
>AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 124
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 105 VDCNINDMNRCPDLQIDVYLXRQHNN 28
VDCNI + D + +++ H+N
Sbjct: 70 VDCNIGGYDFPKDTFLSLFIYGMHHN 95
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -3
Query: 270 TSLENFLSKQFLWYKLARKLIEHERQMDRC 181
T + N + +++ W + R + + R D C
Sbjct: 146 TKVYNSMKREYYWPNMYRTIKKRLRSCDLC 175
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 450 LTPANYHFTTDQFICNY 400
LT H TD+ IC Y
Sbjct: 13 LTTTQIHAATDKVICYY 29
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 175 CYTAIHLTFVFNQLSRQ 225
C+ HL NQLSR+
Sbjct: 287 CFNLYHLASKSNQLSRE 303
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 175 CYTAIHLTFVFNQLSRQ 225
C+ HL NQLSR+
Sbjct: 287 CFNLYHLASKSNQLSRE 303
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,623
Number of Sequences: 336
Number of extensions: 3265
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -