Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15b06
(424 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 122 1e-30
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 122 1e-30
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 106 8e-26
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 104 4e-25
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 23 0.92
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 23 0.92
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 1.2
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 22 2.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 3.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 3.7
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 3.7
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.9
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 4.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 6.5
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 6.5
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 20 8.6
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 20 8.6
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 20 8.6
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 20 8.6
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 61 IQKESTLHLVLRL 73
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 365 IQKESTLHLVLRL 377
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 517 IQKESTLHLVLRL 529
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 593 IQKESTLHLVLRL 605
Score = 122 bits (295), Expect = 1e-30
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 669 IQKESTLHLVLRL 681
Score = 120 bits (289), Expect = 6e-30
Identities = 54/73 (73%), Positives = 65/73 (89%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQR IFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 50 IQKESTLHMVLRL 12
IQKESTLH+VLRL
Sbjct: 441 IQKESTLHLVLRL 453
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 106 bits (255), Expect = 8e-26
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 50 IQKE 39
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 104 bits (249), Expect = 4e-25
Identities = 46/64 (71%), Positives = 56/64 (87%)
Frame = -3
Query: 230 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 51
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQR IFAGKQLED +T++DYN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 50 IQKE 39
IQKE
Sbjct: 109 IQKE 112
Score = 83.0 bits (196), Expect = 1e-18
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = -3
Query: 146 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 12
KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRL
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 45
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 23.4 bits (48), Expect = 0.92
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -3
Query: 323 WVSAACCTIPPSVEARAHSQQPLSFISNSVKMQIF 219
W+ A C+IP V S +++ V +F
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWYQQCVTYNVF 210
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 23.4 bits (48), Expect = 0.92
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -3
Query: 323 WVSAACCTIPPSVEARAHSQQPLSFISNSVKMQIF 219
W+ A C+IP V S +++ V +F
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWYQQCVTYNVF 210
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 1.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 266 VNVPLPPPMVELCNRRP 316
VNVP+PP ++ N +P
Sbjct: 405 VNVPVPPMQSQIINPQP 421
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 102 YLCGQTIGRFQNYGRLQYSKGIY 34
+LC T+ FQNY Y +Y
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLY 168
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 3.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 96 CGQTIGRFQNYGRLQYSKGIY 34
CG I R Q G L+Y+KG Y
Sbjct: 416 CG--IRRVQQLGILRYAKGPY 434
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 3.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 96 CGQTIGRFQNYGRLQYSKGIY 34
CG I R Q G L+Y+KG Y
Sbjct: 416 CG--IRRVQQLGILRYAKGPY 434
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.4 bits (43), Expect = 3.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 199 LPVNVLMNICIFTLLLINDNG 261
+P N++ +C+ T L+ NG
Sbjct: 194 MPYNIVFGLCLTTFGLLPVNG 214
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 309 LLHNSTIGGGKGTFTATVVI 250
L++NS G GTF VV+
Sbjct: 91 LMYNSADEGFDGTFQTNVVV 110
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 309 LLHNSTIGGGKGTFTATVVI 250
L++NS G GTF VV+
Sbjct: 91 LMYNSADEGFDGTFQTNVVV 110
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 309 LLHNSTIGGGKGTFTATVVI 250
L++NS G GTF VV+
Sbjct: 91 LMYNSADEGFDGTFQTNVVV 110
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 309 LLHNSTIGGGKGTFTATVVI 250
L++NS G GTF VV+
Sbjct: 91 LMYNSADEGFDGTFQTNVVV 110
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 309 LLHNSTIGGGKGTFTATVVI 250
L++NS G GTF VV+
Sbjct: 91 LMYNSADEGFDGTFQTNVVV 110
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -3
Query: 323 WVSAACCTIPPSVEARAHSQQPLSFISN 240
W+S+ +PP + P + ISN
Sbjct: 106 WLSSPSGNVPPLTPSPGPPSHPYTVISN 133
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 260 VAVNVPLPPPMVELC 304
+ VN +P P VE+C
Sbjct: 99 IVVNRKMPGPSVEVC 113
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 319 THTTNYFPSTAIDFH 363
++++NYF + DFH
Sbjct: 565 SNSSNYFANKTYDFH 579
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 331 SWCGYRPPVAQFH 293
SW YRP ++H
Sbjct: 32 SWAIYRPDKGEYH 44
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 8.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 388 GLIIFDYGRGNQLPLKGNNSWCGYRPPVAQFHH 290
GL D NQL + +++W Y P + +++
Sbjct: 324 GLYHLDEVYNNQLLTRLDDNWNKYIPAILYYNY 356
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 8.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 388 GLIIFDYGRGNQLPLKGNNSWCGYRPPVAQFHH 290
GL D NQL + +++W Y P + +++
Sbjct: 324 GLYHLDEVYNNQLLTRLDDNWNKYIPAILYYNY 356
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 8.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 388 GLIIFDYGRGNQLPLKGNNSWCGYRPPVAQFHH 290
GL D NQL + +++W Y P + +++
Sbjct: 324 GLYHLDEVYNNQLLTRLDDNWNKYIPAILYYNY 356
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,133
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 32
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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