Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15b02
(377 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00282-1|CAA68393.1| 631|Homo sapiens protein ( Human mRNA for ... 79 4e-15
CR456899-1|CAG33180.1| 631|Homo sapiens RPN2 protein. 79 4e-15
BC020222-1|AAH20222.1| 631|Homo sapiens ribophorin II protein. 79 4e-15
BC003560-1|AAH03560.1| 631|Homo sapiens ribophorin II protein. 79 4e-15
BC002380-1|AAH02380.2| 492|Homo sapiens RPN2 protein protein. 79 4e-15
AL031659-9|CAB41763.1| 631|Homo sapiens ribophorin II protein. 79 4e-15
AL031659-8|CAI42668.1| 615|Homo sapiens ribophorin II protein. 79 4e-15
AJ237734-1|CAB54801.1| 631|Homo sapiens ribophorin II protein. 79 4e-15
BC013028-1|AAH13028.2| 281|Homo sapiens RPN2 protein protein. 79 6e-15
AL031659-11|CAI42671.1| 138|Homo sapiens ribophorin II protein. 74 2e-13
AL031659-12|CAI42672.1| 146|Homo sapiens ribophorin II protein. 36 0.033
AB065537-1|BAC05783.1| 239|Homo sapiens seven transmembrane hel... 35 0.10
AB040963-1|BAA96054.1| 794|Homo sapiens KIAA1530 protein protein. 32 0.54
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 32 0.71
AK131091-1|BAC85141.1| 381|Homo sapiens FLJ00304 protein protein. 32 0.71
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 32 0.71
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 31 0.94
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 31 0.94
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 31 0.94
AB040910-1|BAA96001.1| 870|Homo sapiens KIAA1477 protein protein. 31 0.94
AB065821-1|BAC06040.1| 318|Homo sapiens seven transmembrane hel... 31 1.6
AB065818-1|BAC06037.1| 313|Homo sapiens seven transmembrane hel... 31 1.6
DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase w... 29 3.8
AK123383-1|BAC85601.1| 127|Homo sapiens protein ( Homo sapiens ... 29 3.8
AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease disinte... 29 3.8
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr... 29 3.8
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 29 6.6
X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein. 29 6.6
BC026269-1|AAH26269.1| 253|Homo sapiens chromosome 7 open readi... 29 6.6
AL445309-7|CAI40960.1| 175|Homo sapiens chromosome 6 open readi... 29 6.6
AL160398-2|CAI12304.1| 175|Homo sapiens chromosome 6 open readi... 29 6.6
AL110245-1|CAB53695.1| 175|Homo sapiens hypothetical protein pr... 29 6.6
>Y00282-1|CAA68393.1| 631|Homo sapiens protein ( Human mRNA for
ribophorin II. ).
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>CR456899-1|CAG33180.1| 631|Homo sapiens RPN2 protein.
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>BC020222-1|AAH20222.1| 631|Homo sapiens ribophorin II protein.
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>BC003560-1|AAH03560.1| 631|Homo sapiens ribophorin II protein.
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>BC002380-1|AAH02380.2| 492|Homo sapiens RPN2 protein protein.
Length = 492
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 387 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 446
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 447 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 482
>AL031659-9|CAB41763.1| 631|Homo sapiens ribophorin II protein.
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>AL031659-8|CAI42668.1| 615|Homo sapiens ribophorin II protein.
Length = 615
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 494 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 553
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 554 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 589
>AJ237734-1|CAB54801.1| 631|Homo sapiens ribophorin II protein.
Length = 631
Score = 79.4 bits (187), Expect = 4e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 526 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAA 585
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 586 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 621
>BC013028-1|AAH13028.2| 281|Homo sapiens RPN2 protein protein.
Length = 281
Score = 78.6 bits (185), Expect = 6e-15
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLALGA 192
+ H R E RP +S+ + RIG N+ NF PS +IFHL A
Sbjct: 176 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFIFAPSTIIFHLGHAA 235
Query: 191 SLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 236 MLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 271
>AL031659-11|CAI42671.1| 138|Homo sapiens ribophorin II protein.
Length = 138
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = -1
Query: 263 RIGINLRNFPLVPSALIFHLALGASLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLL 84
RIG N+ NF PS +IFHL A LGL V W QL MF+ ++YL LG+VTFL+G+R+L
Sbjct: 69 RIGANVSNFTFAPSTIIFHLGHAAMLGLMYVYWTQLNMFQTLKYLAILGSVTFLAGNRML 128
>AL031659-12|CAI42672.1| 146|Homo sapiens ribophorin II protein.
Length = 146
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 371 LAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHL 204
+ H R E RP +S+ + RIG N+ NF PS +IFHL
Sbjct: 50 IQHLFREPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHL 105
>AB065537-1|BAC05783.1| 239|Homo sapiens seven transmembrane helix
receptor protein.
Length = 239
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = -1
Query: 230 VPSALIFHLALGASLGLYVVLWLQLTMFEAIRYLLPL 120
+P +L+F LA+GA+ L + +WL+ ++ + + YLL L
Sbjct: 33 LPLSLLFLLAVGANTTLLMTIWLEASLHQPLYYLLSL 69
>AB040963-1|BAA96054.1| 794|Homo sapiens KIAA1530 protein protein.
Length = 794
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -3
Query: 246 AELPPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAASR 73
A PP R +PS + +S AVR+A+A + R P G+ +R +PA +R
Sbjct: 3 ASQPPPRPRLALPSGSFGLSLAVRQALASSHQARRGARPWVSGQA-ASVRAAPALRTR 59
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = -3
Query: 156 DNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETFVHIKLLC 10
+++ P + P RHL ++ +PA + + +N +I+ +K+ VH+ ++C
Sbjct: 186 EDLSKGPPSSVPKSRHLTIKLTPAHSRKALRNSRIVSQKDD-VHVCIMC 233
>AK131091-1|BAC85141.1| 381|Homo sapiens FLJ00304 protein protein.
Length = 381
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = -3
Query: 156 DNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETFVHIKLLC 10
+++ P + P RHL ++ +PA + + +N +I+ +K+ VH+ ++C
Sbjct: 108 EDLSKGPPSSVPKSRHLTIKLTPAHSRKALRNSRIVSQKDD-VHVCIMC 155
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = -3
Query: 156 DNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETFVHIKLLC 10
+++ P + P RHL ++ +PA + + +N +I+ +K+ VH+ ++C
Sbjct: 77 EDLSKGPPSSVPKSRHLTIKLTPAHSRKALRNSRIVSQKDD-VHVCIMC 124
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -3
Query: 237 PPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAA 82
PP +RA P +P + + APA N R PLP PG+R P R P A
Sbjct: 180 PPPGRRANAPPTPLPM----HSSKAPAYN-REKPLPPTPGQRLHPGREGPPA 226
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -3
Query: 237 PPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAA 82
PP +RA P +P + + APA N R PLP PG+R P R P A
Sbjct: 180 PPPGRRANAPPTPLPM----HSSKAPAYN-REKPLPPTPGQRLHPGREGPPA 226
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -3
Query: 237 PPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAA 82
PP +RA P +P + + APA N R PLP PG+R P R P A
Sbjct: 180 PPPGRRANAPPTPLPM----HSSKAPAYN-REKPLPPTPGQRLHPGREGPPA 226
>AB040910-1|BAA96001.1| 870|Homo sapiens KIAA1477 protein protein.
Length = 870
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 186 RAVRRAVAPADNVRSHPLPAAP-GRRHLPLRTSPA 85
R +R +APA R HP P AP G H P +PA
Sbjct: 71 RGLREPLAPALCSRPHPFPVAPRGPHHSPAGETPA 105
>AB065821-1|BAC06040.1| 318|Homo sapiens seven transmembrane helix
receptor protein.
Length = 318
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = -1
Query: 230 VPSALIFHLALGASLGLYVVLWLQLTMFEAIRYLLPL 120
+P +L+F LA+GA+ L + + L+ ++ + + YLL L
Sbjct: 36 LPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSL 72
>AB065818-1|BAC06037.1| 313|Homo sapiens seven transmembrane helix
receptor protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = -1
Query: 230 VPSALIFHLALGASLGLYVVLWLQLTMFEAIRYLLPL 120
+P +L+F LA+GA+ L + + L+ ++ + + YLL L
Sbjct: 32 LPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSL 68
>DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif 17 protein.
Length = 1095
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 156 DNVRSHPLPAAPGRRHLPLRTSPAAASRER 67
D+V PLPAAPG R +P AA R R
Sbjct: 46 DDVHLPPLPAAPGPRRRRRPRTPPAAPRAR 75
>AK123383-1|BAC85601.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ41389 fis, clone BRCAN2024563. ).
Length = 127
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 234 PRTQRAYIPSSPWSISRAVR--RAVAPADNVRSHPLPAAPGRRHLP 103
P + R +P++P + AVR R V ++VR L AAPG+R P
Sbjct: 24 PCSPRNLVPAAPSAPRTAVRLSRLVPAGNSVRCGALDAAPGQRSGP 69
>AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease
disintegrin 17, with thrombospondin domains protein.
Length = 1095
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 156 DNVRSHPLPAAPGRRHLPLRTSPAAASRER 67
D+V PLPAAPG R +P AA R R
Sbjct: 46 DDVHLPPLPAAPGPRRRRRPRTPPAAPRAR 75
>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
protein.
Length = 2548
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 147 RSHPLPAAPGRRHLPLRTSPAAASRER 67
R P P +P R LPLR +PA+ S R
Sbjct: 1 RQRPRPPSPPRSSLPLRRAPASLSAAR 27
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 231 RTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQI 52
+T+R + P SP S R V+P+ HP P +PGR L SP+ + + Q +
Sbjct: 1897 KTER-HPPVSP-SGKTDKRPPVSPSGRTEKHP-PVSPGRTEKRLPVSPSGRTDKHQPVST 1953
Query: 51 IIKKE 37
K E
Sbjct: 1954 AGKTE 1958
>X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein.
Length = 634
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 231 RTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQI 52
+T+R + P SP S R V+P+ HP P +PGR L SP+ + + Q +
Sbjct: 421 KTER-HPPVSP-SGKTDKRPPVSPSGRTEKHP-PVSPGRTEKRLPVSPSGRTDKHQPVST 477
Query: 51 IIKKE 37
K E
Sbjct: 478 AGKTE 482
>BC026269-1|AAH26269.1| 253|Homo sapiens chromosome 7 open reading
frame 47 protein.
Length = 253
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 186 RAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAASRE 70
R VR + P VRS P PA P +P+ S A E
Sbjct: 77 RQVRFRLTPPSPVRSEPQPAVPQELEMPVLKSSLALGLE 115
>AL445309-7|CAI40960.1| 175|Homo sapiens chromosome 6 open reading
frame 85 protein.
Length = 175
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 236 PLVPSALIFHLALGASLGLYVVLWLQLTMFEAIRY 132
PL P L+F + GL V L + +TMF +R+
Sbjct: 68 PLPPGRLLFSIIFILIFGLTVALSVNVTMFSTLRF 102
>AL160398-2|CAI12304.1| 175|Homo sapiens chromosome 6 open reading
frame 85 protein.
Length = 175
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 236 PLVPSALIFHLALGASLGLYVVLWLQLTMFEAIRY 132
PL P L+F + GL V L + +TMF +R+
Sbjct: 68 PLPPGRLLFSIIFILIFGLTVALSVNVTMFSTLRF 102
>AL110245-1|CAB53695.1| 175|Homo sapiens hypothetical protein
protein.
Length = 175
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 236 PLVPSALIFHLALGASLGLYVVLWLQLTMFEAIRY 132
PL P L+F + GL V L + +TMF +R+
Sbjct: 68 PLPPGRLLFSIIFILIFGLTVALSVNVTMFSTLRF 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,544,832
Number of Sequences: 237096
Number of extensions: 740493
Number of successful extensions: 3638
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3638
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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