Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15b02
(377 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p pro... 82 2e-16
AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA... 82 2e-16
AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p pro... 31 0.37
AE014296-74|AAF47372.2| 1264|Drosophila melanogaster CG13882-PA ... 29 1.5
AY070908-1|AAL48530.1| 409|Drosophila melanogaster RE02264p pro... 28 3.5
AF182511-1|AAF01220.1| 410|Drosophila melanogaster ECSIT protein. 28 3.5
AE014297-379|AAF51937.1| 409|Drosophila melanogaster CG10610-PA... 28 3.5
BT022203-1|AAY51597.1| 429|Drosophila melanogaster IP01040p pro... 28 4.6
AY095075-1|AAM11403.1| 295|Drosophila melanogaster RE24507p pro... 28 4.6
AE014296-853|AAF47905.2| 295|Drosophila melanogaster CG15022-PA... 28 4.6
AE014134-3160|AAS64721.2| 429|Drosophila melanogaster CG10604-P... 28 4.6
AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p pro... 27 6.1
AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler lo... 27 6.1
AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B ... 27 6.1
AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA... 27 6.1
AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of th... 27 6.1
AE014296-858|AAN11605.1| 209|Drosophila melanogaster CG32248-PA... 27 8.0
>AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p
protein.
Length = 634
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/100 (38%), Positives = 55/100 (55%)
Frame = -1
Query: 377 PXLAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLAL 198
P + H R + RP +SD+ + ++GIN+ N L PS + FHL
Sbjct: 523 PEIIHQFRVPDKRPPRIVSDIFTGLCITPLVLLFVFWGKLGINVSNLTLAPSTIGFHLGF 582
Query: 197 GASLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLLQR 78
G L L+ V WLQL MF+ +R L+P+ TFL+G+RLL+R
Sbjct: 583 GGILVLFFVFWLQLNMFQTLRLLIPIAVFTFLAGNRLLRR 622
>AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA
protein.
Length = 634
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/100 (38%), Positives = 55/100 (55%)
Frame = -1
Query: 377 PXLAHTXRXAEARPAXALSDVCSXXXXXXXXXXXXXXARIGINLRNFPLVPSALIFHLAL 198
P + H R + RP +SD+ + ++GIN+ N L PS + FHL
Sbjct: 523 PEIIHQFRVPDKRPPRIVSDIFTGLCITPLVLLFVFWGKLGINVSNLTLAPSTIGFHLGF 582
Query: 197 GASLGLYVVLWLQLTMFEAIRYLLPLGAVTFLSGHRLLQR 78
G L L+ V WLQL MF+ +R L+P+ TFL+G+RLL+R
Sbjct: 583 GGILVLFFVFWLQLNMFQTLRLLIPIAVFTFLAGNRLLRR 622
>AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p
protein.
Length = 147
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 240 LPPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAASR 73
+PP T R +P+SP S + RA + P A+P R + T+P ASR
Sbjct: 25 VPPPTTRKLVPTSPRSAPTSSPRATT---TTSTRPATASPPRSPELVETTPTEASR 77
>AE014296-74|AAF47372.2| 1264|Drosophila melanogaster CG13882-PA
protein.
Length = 1264
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 153 NVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQ 55
+V + PLPA P RR RTSP+ +++Q Q
Sbjct: 72 DVSTLPLPALPKRRRTRSRTSPSKHRQQQQQQQ 104
>AY070908-1|AAL48530.1| 409|Drosophila melanogaster RE02264p
protein.
Length = 409
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 162 PADNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETF 31
P N +P PG ++LP +P AA+++R + E F
Sbjct: 33 PKQNPNPNPRAQKPGTKNLPALRNPFAAAQDRTKNSYLTMVEIF 76
>AF182511-1|AAF01220.1| 410|Drosophila melanogaster ECSIT protein.
Length = 410
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 162 PADNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETF 31
P N +P PG ++LP +P AA+++R + E F
Sbjct: 33 PKQNPNPNPRAQKPGTKNLPALRNPFAAAQDRTKNSYLTMVEIF 76
>AE014297-379|AAF51937.1| 409|Drosophila melanogaster CG10610-PA
protein.
Length = 409
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 162 PADNVRSHPLPAAPGRRHLPLRTSPAAASRERQNLQIIIKKETF 31
P N +P PG ++LP +P AA+++R + E F
Sbjct: 33 PKQNPNPNPRAQKPGTKNLPALRNPFAAAQDRTKNSYLTMVEIF 76
>BT022203-1|AAY51597.1| 429|Drosophila melanogaster IP01040p
protein.
Length = 429
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 216 YIPSSPWSISRAVRRAVAPADNVRSHPLP-AAPGRRHLPLRTSPAAASRERQN 61
Y P S + ++ R A A +N HP + P + H P S +A + R N
Sbjct: 76 YAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSN 128
>AY095075-1|AAM11403.1| 295|Drosophila melanogaster RE24507p
protein.
Length = 295
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 237 PPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLP 103
PP + Y+P +P ++R + VAP+ P P AP + +LP
Sbjct: 181 PPTPEVKYLPPAP--VARYLPPKVAPSLPPPPPPPPVAPKKLYLP 223
>AE014296-853|AAF47905.2| 295|Drosophila melanogaster CG15022-PA
protein.
Length = 295
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 237 PPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLP 103
PP + Y+P +P ++R + VAP+ P P AP + +LP
Sbjct: 181 PPTPEVKYLPPAP--VARYLPPKVAPSLPPPPPPPPVAPKKLYLP 223
>AE014134-3160|AAS64721.2| 429|Drosophila melanogaster CG10604-PB,
isoform B protein.
Length = 429
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 216 YIPSSPWSISRAVRRAVAPADNVRSHPLP-AAPGRRHLPLRTSPAAASRERQN 61
Y P S + ++ R A A +N HP + P + H P S +A + R N
Sbjct: 76 YAPKSSRNAVKSARSAFAHDNNPHKHPSQHSHPPQSHPPASASASATATARSN 128
>AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p protein.
Length = 1928
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 QLAELP-PRTQRAYIPSSPWSI-SRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAA 79
+L E P P Q ++PS I S+ +++ ++ P + PG++H P + PA
Sbjct: 1373 RLKESPSPHDQPKHMPSQQQMIASKLIKQEPMTKQEIKQEP-NSNPGQQHPPPQQQPAPQ 1431
Query: 78 SRERQ 64
+++Q
Sbjct: 1432 PQQQQ 1436
>AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler long
isoform protein.
Length = 2302
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 QLAELP-PRTQRAYIPSSPWSI-SRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAA 79
+L E P P Q ++PS I S+ +++ ++ P + PG++H P + PA
Sbjct: 1747 RLKESPSPHDQPKHMPSQQQMIASKLIKQEPMTKQEIKQEP-NSNPGQQHPPPQQQPAPQ 1805
Query: 78 SRERQ 64
+++Q
Sbjct: 1806 PQQQQ 1810
>AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 QLAELP-PRTQRAYIPSSPWSI-SRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAA 79
+L E P P Q ++PS I S+ +++ ++ P + PG++H P + PA
Sbjct: 1747 RLKESPSPHDQPKHMPSQQQMIASKLIKQEPMTKQEIKQEP-NSNPGQQHPPPQQQPAPQ 1805
Query: 78 SRERQ 64
+++Q
Sbjct: 1806 PQQQQ 1810
>AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA,
isoform A protein.
Length = 2280
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 QLAELP-PRTQRAYIPSSPWSI-SRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAA 79
+L E P P Q ++PS I S+ +++ ++ P + PG++H P + PA
Sbjct: 1725 RLKESPSPHDQPKHMPSQQQMIASKLIKQEPMTKQEIKQEP-NSNPGQQHPPPQQQPAPQ 1783
Query: 78 SRERQ 64
+++Q
Sbjct: 1784 PQQQQ 1788
>AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of thick
veins protein.
Length = 2310
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 QLAELP-PRTQRAYIPSSPWSI-SRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAA 79
+L E P P Q ++PS I S+ +++ ++ P + PG++H P + PA
Sbjct: 1755 RLKESPSPHDQPKHMPSQQQMIASKLIKQEPMTKQEIKQEP-NSNPGQQHPPPQQQPAPQ 1813
Query: 78 SRERQ 64
+++Q
Sbjct: 1814 PQQQQ 1818
>AE014296-858|AAN11605.1| 209|Drosophila melanogaster CG32248-PA
protein.
Length = 209
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = -3
Query: 252 QLAELPPRTQRAYIPSSPWSISRAVRRAVAPADNVRSHPLPAAPGRRHLPLRTSPAAAS 76
Q A P R Y+P +P A A AP + P PA + +PA S
Sbjct: 106 QQAASAPAPARTYVPPAPHVHHHAAASAPAPVQSFAPAPAPAPAPVQSFASAPAPAFES 164
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,032,312
Number of Sequences: 53049
Number of extensions: 216968
Number of successful extensions: 727
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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