Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15b01
         (158 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...    77   3e-15
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...    77   3e-15
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...    77   3e-15
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...    76   6e-15
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...    76   6e-15
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...    73   5e-14

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK   +GI P+RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSER 62


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK   +GI P+RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSER 62


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score = 77.0 bits (181), Expect = 3e-15
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK   +GI P+RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSER 62


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score = 76.2 bits (179), Expect = 6e-15
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK    GI P+RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSER 62


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score = 76.2 bits (179), Expect = 6e-15
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK    GI P+RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSER 62


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score = 72.9 bits (171), Expect = 5e-14
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -1

Query: 158 LXXNTKSNQXRIVRTPGGRXVYQYVXXPKKIPRCGQCKSXXRGIXPARPAER 3
           L  NT+SN+ RIVRTPGGR VYQYV     +PRCGQCK    GI  +RP+ER
Sbjct: 11  LSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPSER 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,236,436
Number of Sequences: 53049
Number of extensions: 55095
Number of successful extensions: 92
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 24,988,368
effective HSP length: 33
effective length of database: 23,237,751
effective search space used: 441517269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)