Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15a22
         (140 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           20   9.2  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    20   9.2  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 84  NCVLHRPASQVIHRPG 131
           NC+   P+SQ  H  G
Sbjct: 294 NCIQQHPSSQQQHHNG 309


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 131 PWTVDHLARGSMKNAVNCAS 72
           PWTV  LAR   ++A+   S
Sbjct: 142 PWTVAILARTKTESALKYLS 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,914
Number of Sequences: 2352
Number of extensions: 1280
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 26
effective length of database: 502,827
effective search space used: 10056540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)