Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15a15
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 82 2e-16
AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p pro... 82 2e-16
AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein ... 71 6e-13
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 59 3e-09
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 59 3e-09
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 59 3e-09
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 59 3e-09
X02600-2|CAA26446.1| 146|Drosophila melanogaster protein ( Dros... 43 1e-04
AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p pro... 31 0.58
AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-P... 31 0.58
AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-P... 31 0.58
AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-P... 31 0.58
AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-P... 31 0.58
AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-P... 31 0.58
AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-P... 31 0.58
AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA... 30 1.3
AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec... 29 3.1
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P... 29 3.1
AE013599-848|AAF58952.2| 875|Drosophila melanogaster CG13739-PA... 29 3.1
AY070600-1|AAL48071.1| 424|Drosophila melanogaster RE70055p pro... 28 5.4
AF061255-1|AAF35430.1| 424|Drosophila melanogaster JNK kinase 2... 28 5.4
AF035552-1|AAC39036.1| 424|Drosophila melanogaster MAP kinase k... 28 5.4
AF035551-1|AAC39035.1| 424|Drosophila melanogaster stress activ... 28 5.4
AE014297-772|AAF54258.1| 424|Drosophila melanogaster CG9738-PA ... 28 5.4
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 5 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 184
+HY K GF D+D+ GD R+S +G+V +++GGP++W S KQ VALSSTEAEY+
Sbjct: 864 LHYQKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYM 923
Query: 185 AAAECCKELLYIRDL 229
A CKE + +R L
Sbjct: 924 ALTTACKEAIALRRL 938
>AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p
protein.
Length = 714
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 5 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 184
+HY K GF D+D+ GD R+S +G+V +++GGP++W S KQ VALSSTEAEY+
Sbjct: 552 LHYQKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYM 611
Query: 185 AAAECCKELLYIRDL 229
A CKE + +R L
Sbjct: 612 ALTTACKEAIALRRL 626
>AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein
protein.
Length = 415
Score = 70.9 bits (166), Expect = 6e-13
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +2
Query: 5 IHYSKGDNILRGFCDSDFAGDPDTRRSTSGFVIWMNGGPIAWSSRKQSVVALSSTEAEYI 184
I Y K +++ F D+D+A D R+S SG+ M G +W S KQSV+A SSTEAEYI
Sbjct: 255 IIYMKTGELVKEFADADWANDKVDRKSYSGYAFLMAGSAFSWGSSKQSVIAQSSTEAEYI 314
Query: 185 AAAECCKELLYIRDL 229
A + KE +++R L
Sbjct: 315 ALSTAAKEAVFLRRL 329
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 199
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 853 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 912
Query: 200 CKELLYIRDL 229
+E L+++ L
Sbjct: 913 VREALWLKFL 922
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 199
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 200 CKELLYIRDL 229
+E L+++ L
Sbjct: 1305 VREALWLKFL 1314
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 199
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 200 CKELLYIRDL 229
+E L+++ L
Sbjct: 1305 VREALWLKFL 1314
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p protein.
Length = 1409
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 DNILRGFCDSDFAGDPDTRRSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAEC 199
+N + G+ DSD+AG R+ST+G++ M + I W++++Q+ VA SSTEAEY+A E
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304
Query: 200 CKELLYIRDL 229
+E L+++ L
Sbjct: 1305 VREALWLKFL 1314
>X02600-2|CAA26446.1| 146|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 146
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 RSTSGFVIWM-NGGPIAWSSRKQSVVALSSTEAEYIAAAECCKELLYIRDL 229
+ST+G++ M + I W++++Q+ VA SSTEAEY+A E +E L+++ L
Sbjct: 1 KSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL 51
>AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p
protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-PD,
isoform D protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-PC,
isoform C protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-PB,
isoform B protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-PA,
isoform A protein.
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-PF,
isoform F protein.
Length = 814
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-PE,
isoform E protein.
Length = 814
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = -1
Query: 215 IAVPYSILQQQ---YTQLQCSKVPQL--IVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQ 51
+A P +LQQQ + QLQ +PQL ++ LS Q + SS S + Y + Q Q+ Q
Sbjct: 335 VAPPMELLQQQQQNHQQLQVGSLPQLQTLLTLSQQQQSNSSSTSPYEIYHSTPQKPQQQQ 394
>AE014296-390|AAF47594.1| 553|Drosophila melanogaster CG12361-PA
protein.
Length = 553
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 152 QLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIYCHLYCNEY 3
+L ++ QL HH + Q Q+ Q Q H+ S + LY ++Y
Sbjct: 490 ELAAAAAAAQLHHHHQQQQQQQQQQHAQQQHAQQQHQGGSEFMKLYYDDY 539
>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone receptor
co-activatorTaiman protein.
Length = 2035
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -1
Query: 215 IAVPYSILQQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHK 42
+A+ + QQQ Q + P L+ Q H + QNQ++ + + RNQ ++
Sbjct: 1413 LALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQQNQQHIMQRLEAMRNQGNQ 1470
>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
protein.
Length = 2047
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -1
Query: 215 IAVPYSILQQQYTQLQCSKVPQLIVFLSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHK 42
+A+ + QQQ Q + P L+ Q H + QNQ++ + + RNQ ++
Sbjct: 1413 LALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQQNQQHIMQRLEAMRNQGNQ 1470
>AE013599-848|AAF58952.2| 875|Drosophila melanogaster CG13739-PA
protein.
Length = 875
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 137 LSSMQLVHHSSRSQNQKYFVSCQDHQRNQNHKNLSIYCHLY 15
LS+ Q HH + Q Q + Q HQ+ Q + ++ H +
Sbjct: 193 LSARQQHHHLLQQQQQHHHQQQQQHQQQQQQQQHQLHLHTF 233
>AY070600-1|AAL48071.1| 424|Drosophila melanogaster RE70055p
protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = -3
Query: 393 SVFCQFCARIKQYVINQFSQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 214
SVF Q C ++ + + ++ V C ES + Y + LE I
Sbjct: 331 SVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRL--LEMPFIR 388
Query: 213 SSSLQHSAAAIYSASVLESATTD 145
H+ A+Y A +LES D
Sbjct: 389 RGETSHTDVAVYVADILESMEKD 411
>AF061255-1|AAF35430.1| 424|Drosophila melanogaster JNK kinase 2
protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = -3
Query: 393 SVFCQFCARIKQYVINQFSQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 214
SVF Q C ++ + + ++ V C ES + Y + LE I
Sbjct: 331 SVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRL--LEMPFIR 388
Query: 213 SSSLQHSAAAIYSASVLESATTD 145
H+ A+Y A +LES D
Sbjct: 389 RGETSHTDVAVYVADILESMEKD 411
>AF035552-1|AAC39036.1| 424|Drosophila melanogaster MAP kinase
kinase 4 protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = -3
Query: 393 SVFCQFCARIKQYVINQFSQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 214
SVF Q C ++ + + ++ V C ES + Y + LE I
Sbjct: 331 SVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRL--LEMPFIR 388
Query: 213 SSSLQHSAAAIYSASVLESATTD 145
H+ A+Y A +LES D
Sbjct: 389 RGETSHTDVAVYVADILESMEKD 411
>AF035551-1|AAC39035.1| 424|Drosophila melanogaster stress
activated MAP kinase kinase4 protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = -3
Query: 393 SVFCQFCARIKQYVINQFSQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 214
SVF Q C ++ + + ++ V C ES + Y + LE I
Sbjct: 331 SVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRL--LEMPFIR 388
Query: 213 SSSLQHSAAAIYSASVLESATTD 145
H+ A+Y A +LES D
Sbjct: 389 RGETSHTDVAVYVADILESMEKD 411
>AE014297-772|AAF54258.1| 424|Drosophila melanogaster CG9738-PA
protein.
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = -3
Query: 393 SVFCQFCARIKQYVINQFSQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 214
SVF Q C ++ + + ++ V C ES + Y + LE I
Sbjct: 331 SVFEQLCQVVQGEPPRLLTSYNGMEFSKEFVDFVNTCLIKKESDRPKYSRL--LEMPFIR 388
Query: 213 SSSLQHSAAAIYSASVLESATTD 145
H+ A+Y A +LES D
Sbjct: 389 RGETSHTDVAVYVADILESMEKD 411
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,239
Number of Sequences: 53049
Number of extensions: 296932
Number of successful extensions: 1129
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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