Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15a03
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01157-1|AAA62471.1|  463|Homo sapiens glucagon-like peptide-1 r...    34   0.38 
U01156-1|AAC50050.1|  463|Homo sapiens glucagon-like peptide-1 r...    34   0.38 
U01104-1|AAA03614.1|  463|Homo sapiens glucagon-like peptide-1 r...    34   0.38 
BC113493-1|AAI13494.1|  463|Homo sapiens glucagon-like peptide 1...    34   0.38 
BC112126-1|AAI12127.1|  463|Homo sapiens glucagon-like peptide 1...    34   0.38 
AY439112-1|AAR05444.1|  463|Homo sapiens glucagon-like peptide 1...    34   0.38 
U10037-1|AAA63787.1|  463|Homo sapiens glucagon-like peptide-1 r...    34   0.51 
L23503-1|AAA17021.1|  463|Homo sapiens glucagon-like peptide-1 r...    34   0.51 
AL035690-6|CAB71177.1|  463|Homo sapiens glucagon-like peptide 1...    34   0.51 
AB065685-1|BAC05908.1|  463|Homo sapiens seven transmembrane hel...    34   0.51 

>U01157-1|AAA62471.1|  463|Homo sapiens glucagon-like peptide-1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>U01156-1|AAC50050.1|  463|Homo sapiens glucagon-like peptide-1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>U01104-1|AAA03614.1|  463|Homo sapiens glucagon-like peptide-1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>BC113493-1|AAI13494.1|  463|Homo sapiens glucagon-like peptide 1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>BC112126-1|AAI12127.1|  463|Homo sapiens glucagon-like peptide 1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>AY439112-1|AAR05444.1|  463|Homo sapiens glucagon-like peptide 1
           receptor protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>U10037-1|AAA63787.1|  463|Homo sapiens glucagon-like peptide-1
           receptor protein.
          Length = 463

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>L23503-1|AAA17021.1|  463|Homo sapiens glucagon-like peptide-1
           receptor protein.
          Length = 463

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>AL035690-6|CAB71177.1|  463|Homo sapiens glucagon-like peptide 1
           receptor protein.
          Length = 463

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


>AB065685-1|BAC05908.1|  463|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 463

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 426 FQSMYTATASACYKLNVEG-HSDSLRAFRVDSDE---NIYVNVGNGVKALFNYPWVMVK 262
           F  M    A+  Y L VEG +  +L AF V S++    +YV++G GV  LF  PW +VK
Sbjct: 230 FLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFVVPWGIVK 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,416,566
Number of Sequences: 237096
Number of extensions: 1796075
Number of successful extensions: 2825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2825
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)