Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15a03
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p pro... 32 0.78
AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA ... 32 0.78
BT023509-1|AAY84909.1| 702|Drosophila melanogaster LD07105p pro... 30 3.1
AF145304-1|AAF08385.1| 919|Drosophila melanogaster 26S proteaso... 30 3.1
AF132182-1|AAD34770.1| 919|Drosophila melanogaster unknown prot... 30 3.1
AE014296-3245|AAF49095.2| 919|Drosophila melanogaster CG7762-PA... 30 3.1
AE013599-2747|AAF57652.1| 702|Drosophila melanogaster CG15072-P... 30 3.1
U58976-1|AAB58464.1| 604|Drosophila melanogaster bruno protein. 29 4.1
AY051758-1|AAK93182.1| 604|Drosophila melanogaster LD29068p pro... 29 4.1
AE014134-2183|AAN10812.1| 604|Drosophila melanogaster CG31762-P... 29 4.1
AE014134-2182|AAN10811.1| 616|Drosophila melanogaster CG31762-P... 29 4.1
AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-P... 29 4.1
>AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p
protein.
Length = 595
Score = 31.9 bits (69), Expect = 0.78
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 609 TSVNTNDLSFEAQ--RINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ 436
+++NTN+ + + Q N+N SS NG+ I N N S +V S +++ +
Sbjct: 69 SNLNTNNEASDEQTGNSNSNTSSHSRNINGLPSSNSNIDNANSNSSSVSSLSTTTSAISG 128
Query: 435 IISFQSMYTATASA 394
+ +S+ AT +A
Sbjct: 129 VDQQESLILATPTA 142
>AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA
protein.
Length = 595
Score = 31.9 bits (69), Expect = 0.78
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 609 TSVNTNDLSFEAQ--RINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ 436
+++NTN+ + + Q N+N SS NG+ I N N S +V S +++ +
Sbjct: 69 SNLNTNNEASDEQTGNSNSNTSSHSRNINGLPSSNSNIDNANSNSSSVSSLSTTTSAISG 128
Query: 435 IISFQSMYTATASA 394
+ +S+ AT +A
Sbjct: 129 VDQQESLILATPTA 142
>BT023509-1|AAY84909.1| 702|Drosophila melanogaster LD07105p
protein.
Length = 702
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 618 SRDTSVNTNDLSFEAQR-INNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSP 463
S D VN LS A +N N+ T G V H + N NVP + + P
Sbjct: 459 SNDPPVNAQHLSAHAGGGVNGANTRRHTVGPGDVAHEQALANPNVPPIDFKCP 511
>AF145304-1|AAF08385.1| 919|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p97 protein.
Length = 919
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = -3
Query: 453 VELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPW 274
+ELV+QII + + A A AC L H L F DE+ Y V +++ YP+
Sbjct: 181 IELVKQIIPYNMEHNAEADACDLLIEIDHLHLLSDF---VDESAYPRVCLYLQSC--YPY 235
Query: 273 VMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPAL 163
V +N ++ +T +Q S N +T AL
Sbjct: 236 VPDPDNTIIL------ETALQLSRKFNQYTQAMRLAL 266
>AF132182-1|AAD34770.1| 919|Drosophila melanogaster unknown
protein.
Length = 919
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = -3
Query: 453 VELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPW 274
+ELV+QII + + A A AC L H L F DE+ Y V +++ YP+
Sbjct: 181 IELVKQIIPYNMEHNAEADACDLLIEIDHLHLLSDF---VDESAYPRVCLYLQSC--YPY 235
Query: 273 VMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPAL 163
V +N ++ +T +Q S N +T AL
Sbjct: 236 VPDPDNTIIL------ETALQLSRKFNQYTQAMRLAL 266
>AE014296-3245|AAF49095.2| 919|Drosophila melanogaster CG7762-PA
protein.
Length = 919
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = -3
Query: 453 VELVEQIISFQSMYTATASACYKLNVEGHSDSLRAFRVDSDENIYVNVGNGVKALFNYPW 274
+ELV+QII + + A A AC L H L F DE+ Y V +++ YP+
Sbjct: 181 IELVKQIIPYNMEHNAEADACDLLIEIDHLHLLSDF---VDESAYPRVCLYLQSC--YPY 235
Query: 273 VMVKENNMVSFMSANEDTTIQFSVIMNSFTSIGEPAL 163
V +N ++ +T +Q S N +T AL
Sbjct: 236 VPDPDNTIIL------ETALQLSRKFNQYTQAMRLAL 266
>AE013599-2747|AAF57652.1| 702|Drosophila melanogaster CG15072-PA
protein.
Length = 702
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 618 SRDTSVNTNDLSFEAQR-INNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSP 463
S D VN LS A +N N+ T G V H + N NVP + + P
Sbjct: 459 SNDPPVNAQHLSAHAGGGVNGANTRRHTVGPGDVAHEQALANPNVPPIDFKCP 511
>U58976-1|AAB58464.1| 604|Drosophila melanogaster bruno protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 564 NNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ-IISFQSMYTATASAC- 391
NNNN+S GT+ N + V N N PSL + N+ V + I+S + + C
Sbjct: 60 NNNNNSNGTSSNNSL--NVGNNNSN-PSLGGTNSNALVSVGSNGIMSAAGLVNNNNNPCS 116
Query: 390 YKLNVEGHSDSLRAFRVDSDENI 322
NV D FR+D+D +
Sbjct: 117 ANRNVVAMVDDDACFRLDTDATV 139
>AY051758-1|AAK93182.1| 604|Drosophila melanogaster LD29068p
protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 564 NNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ-IISFQSMYTATASAC- 391
NNNN+S GT+ N + V N N PSL + N+ V + I+S + + C
Sbjct: 60 NNNNNSNGTSSNNSL--NVGNNNSN-PSLGGSNSNALVSVGSNGIMSAAGLVNNNNNPCS 116
Query: 390 YKLNVEGHSDSLRAFRVDSDENI 322
NV D FR+D+D +
Sbjct: 117 ANRNVVAMVDDDACFRLDTDATV 139
>AE014134-2183|AAN10812.1| 604|Drosophila melanogaster CG31762-PA,
isoform A protein.
Length = 604
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 564 NNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ-IISFQSMYTATASAC- 391
NNNN+S GT+ N + V N N PSL + N+ V + I+S + + C
Sbjct: 60 NNNNNSNGTSSNNSL--NVGNNNSN-PSLGGSNSNALVSVGSNGIMSAAGLVNNNNNPCS 116
Query: 390 YKLNVEGHSDSLRAFRVDSDENI 322
NV D FR+D+D +
Sbjct: 117 ANRNVVAMVDDDACFRLDTDATV 139
>AE014134-2182|AAN10811.1| 616|Drosophila melanogaster CG31762-PC,
isoform C protein.
Length = 616
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 564 NNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ-IISFQSMYTATASAC- 391
NNNN+S GT+ N + V N N PSL + N+ V + I+S + + C
Sbjct: 60 NNNNNSNGTSSNNSL--NVGNNNSN-PSLGGSNSNALVSVGSNGIMSAAGLVNNNNNPCS 116
Query: 390 YKLNVEGHSDSLRAFRVDSDENI 322
NV D FR+D+D +
Sbjct: 117 ANRNVVAMVDDDACFRLDTDATV 139
>AE014134-2181|AAN10810.1| 810|Drosophila melanogaster CG31762-PB,
isoform B protein.
Length = 810
Score = 29.5 bits (63), Expect = 4.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 564 NNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQ-IISFQSMYTATASAC- 391
NNNN+S GT+ N + V N N PSL + N+ V + I+S + + C
Sbjct: 266 NNNNNSNGTSSNNSL--NVGNNNSN-PSLGGSNSNALVSVGSNGIMSAAGLVNNNNNPCS 322
Query: 390 YKLNVEGHSDSLRAFRVDSDENI 322
NV D FR+D+D +
Sbjct: 323 ANRNVVAMVDDDACFRLDTDATV 345
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,706,303
Number of Sequences: 53049
Number of extensions: 598101
Number of successful extensions: 1681
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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