Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14p16
         (788 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p pro...    30   3.1  
AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like ...    30   3.1  
AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA...    30   3.1  
BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p pro...    29   9.6  
AY069547-1|AAL39692.1|  545|Drosophila melanogaster LD27406p pro...    29   9.6  
AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p pro...    29   9.6  
AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA...    29   9.6  
AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-P...    29   9.6  
AE013599-1859|AAF58269.2|  545|Drosophila melanogaster CG8531-PA...    29   9.6  

>AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p
           protein.
          Length = 781

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 495 GS*ILKIHANCGFGGYTIPATMSRSRPARGVKCSPPGQELASTVG 629
           G+ +L   A C F GY IP  +       G+  + PG+EL S++G
Sbjct: 163 GNSLLTFSAQCNFSGYKIPLEVIEQIQIDGL--AKPGKELWSSLG 205


>AF162681-1|AAD50777.1|  737|Drosophila melanogaster maroon-like
           protein protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 495 GS*ILKIHANCGFGGYTIPATMSRSRPARGVKCSPPGQELASTVG 629
           G+ +L   A C F GY IP  +       G+  + PG+EL S++G
Sbjct: 163 GNSLLTFSAQCNFSGYKIPLEVIEQIQIDGL--AKPGKELWSSLG 205


>AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA
           protein.
          Length = 781

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 495 GS*ILKIHANCGFGGYTIPATMSRSRPARGVKCSPPGQELASTVG 629
           G+ +L   A C F GY IP  +       G+  + PG+EL S++G
Sbjct: 163 GNSLLTFSAQCNFSGYKIPLEVIEQIQIDGL--AKPGKELWSSLG 205


>BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p
           protein.
          Length = 1434

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +1

Query: 631 GY*L*DFR*LTSILKKADINHLDI*GSTYVTKII*KQKIYLDG 759
           GY   D R + +  K +++ + ++ G+ YV+KI+ K+K  L+G
Sbjct: 24  GYISSDPRLMATKFKSSEVPNRELIGTDYVSKIVAKEKCLLNG 66


>AY069547-1|AAL39692.1|  545|Drosophila melanogaster LD27406p
           protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 199 KSSRSFHPDPSLDPD 155
           K SR FHPD  LDPD
Sbjct: 37  KQSRMFHPDKHLDPD 51


>AY058343-1|AAL13572.1|  403|Drosophila melanogaster GH11867p
           protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 536 SKSTVCVYLKYLRTAMHTSVWRQHSLS 456
           S +    Y +Y+RT  HT  W  H+++
Sbjct: 125 SSTAFTAYRRYVRTIFHTQAWYNHNIA 151


>AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA
           protein.
          Length = 1434

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +1

Query: 631 GY*L*DFR*LTSILKKADINHLDI*GSTYVTKII*KQKIYLDG 759
           GY   D R + +  K +++ + ++ G+ YV+KI+ K+K  L+G
Sbjct: 24  GYISSDPRLMATKFKSSEVPNRELIGTDYVSKIVAKEKCLLNG 66


>AE014297-1960|AAN13634.1|  403|Drosophila melanogaster CG31344-PA
           protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 536 SKSTVCVYLKYLRTAMHTSVWRQHSLS 456
           S +    Y +Y+RT  HT  W  H+++
Sbjct: 125 SSTAFTAYRRYVRTIFHTQAWYNHNIA 151


>AE013599-1859|AAF58269.2|  545|Drosophila melanogaster CG8531-PA
           protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 199 KSSRSFHPDPSLDPD 155
           K SR FHPD  LDPD
Sbjct: 37  KQSRMFHPDKHLDPD 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,637,028
Number of Sequences: 53049
Number of extensions: 799879
Number of successful extensions: 1587
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)