Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14p14
         (262 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   0.23 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.23 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   0.23 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   2.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   2.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    19   8.8  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.23
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 199 NQRYQRLFN*GEEERRQIGQNKEEP 125
           NQ Y ++F   E+   QI ++++EP
Sbjct: 96  NQNYSKVFGNDEKALEQIAKSEKEP 120


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.23
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 199 NQRYQRLFN*GEEERRQIGQNKEEP 125
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.23
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 199 NQRYQRLFN*GEEERRQIGQNKEEP 125
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  MTRVYRNLEHRTLNLTFSGFFFIL 142
           + +VY  L   T+NLTF     IL
Sbjct: 173 VVQVYPRLVVNTINLTFLTLLMIL 196


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 216 FNMPREIKDIKDFL 175
           FN+P E  ++ DFL
Sbjct: 95  FNIPDEKNEVNDFL 108


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 124 RVLLYFDRF 150
           RVL+YFD F
Sbjct: 225 RVLMYFDIF 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,533
Number of Sequences: 336
Number of extensions: 1058
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)