Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14p12
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM294003-1|CAL25907.1|  449|Drosophila melanogaster CG7387 protein.    32   0.77 
AY069734-1|AAL39879.1|  449|Drosophila melanogaster LP05202p pro...    30   3.1  
AM294008-1|CAL25912.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294007-1|CAL25911.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294006-1|CAL25910.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294005-1|CAL25909.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294004-1|CAL25908.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294002-1|CAL25904.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294001-1|CAL25903.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AM294000-1|CAL25902.1|  449|Drosophila melanogaster CG7387 protein.    30   3.1  
AE014296-1394|AAF50470.2|  449|Drosophila melanogaster CG7387-PA...    30   3.1  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   7.1  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   7.1  

>AM294003-1|CAL25907.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +PT      R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPTVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AY069734-1|AAL39879.1|  449|Drosophila melanogaster LP05202p
           protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294008-1|CAL25912.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294007-1|CAL25911.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294006-1|CAL25910.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294005-1|CAL25909.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294004-1|CAL25908.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294002-1|CAL25904.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294001-1|CAL25903.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AM294000-1|CAL25902.1|  449|Drosophila melanogaster CG7387 protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AE014296-1394|AAF50470.2|  449|Drosophila melanogaster CG7387-PA
           protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -1

Query: 330 RNTPPTGY--RIPDYNQTSAGQFH*QTKAPTCI*SCRRPTCRDWYQT*LW----ATLQSA 169
           R T P  Y  R  +  +TSAG    Q  +P       R   +D+Y   L     AT+Q  
Sbjct: 57  RTTKPAYYPDRQREAKRTSAGATPQQVSSPAVKYPQSRGMPKDYYYKVLGVNRHATIQQI 116

Query: 168 RSAFYALRIQCNP 130
           RSAFYAL  + +P
Sbjct: 117 RSAFYALAKRYHP 129


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 57   QPFYQAYLHIKRAQQKYNDTLDDRMDYIESVMRRRHYVPIEALPTIRFDTNLGTL 221
            Q + + Y  I  A Q+Y+  + D  ++I++ +   HY     L  I   TNL  L
Sbjct: 4061 QNYVERYEGIVSAHQQYSKAVMDAQEFIDATLNTVHYWGDLDLEQISLHTNLDRL 4115


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 57   QPFYQAYLHIKRAQQKYNDTLDDRMDYIESVMRRRHYVPIEALPTIRFDTNLGTL 221
            Q + + Y  I  A Q+Y+  + D  ++I++ +   HY     L  I   TNL  L
Sbjct: 4061 QNYVERYEGIVSAHQQYSKAVMDAQEFIDATLNTVHYWGDLDLEQISLHTNLDRL 4115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,105,873
Number of Sequences: 53049
Number of extensions: 819512
Number of successful extensions: 1997
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)