Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14p08
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.3  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.7  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 60  ESQTRAGDEIASFLRYCRMCG 122
           E + R G  IA++L+Y ++CG
Sbjct: 150 EDKHRLGTAIAAYLQYQKICG 170


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 330 MFKLCNLCSCSFYLINIFYAL--HSTIELPNICLTRLGRLNF 449
           +F LCNL +    ++  FY+L     +++ N+ +T    +NF
Sbjct: 319 VFLLCNLPAMMINIVEAFYSLIIEYMVKVSNLLVTINSSVNF 360


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 26  FKILQTRFCNSRKPNEGRRRNRFVPSLLSDVWNVW 130
           F+I      N   PN GRRR    P+    ++ VW
Sbjct: 9   FEITDYDLANEFNPNRGRRR----PTKNQQIYGVW 39


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -2

Query: 747 DKRTTLEELLIERGEKIQMLQPQQYINSGIEIPFCDDSEFLNRLLKHIDPYPLSRMYYNA 568
           D +   ++L I+   KI  L   ++   G +    DD E+L  +   I P P S++   A
Sbjct: 771 DVKIVHQKLDIKAESKIGSLDNLKHKPGGGDKKIFDDKEYLKNIEHPITPSPSSQVKSGA 830

Query: 567 AN 562
            +
Sbjct: 831 GS 832


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 475 GKY*ETQQQKFKRPRRVKHIFGSSIVECKA 386
           G   +T+ QK   P+ + H FG+  + C A
Sbjct: 823 GNLNDTEVQKSLPPKFLIHTFGNGFLMCSA 852


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 721 VDRARREDTNVAAATIHQQRYRNSVLRRFRVFE 623
           VD+      N    T  + R +  VL+RFR+ E
Sbjct: 579 VDKVATNPQNCLKQTTIEHRKQEEVLKRFRMHE 611


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 690 LQPQQYINSGIEIPFCDDSEFLNR 619
           +Q Q+Y+N+   I +CD   FLNR
Sbjct: 668 VQHQEYLNTTALISYCD---FLNR 688


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 690 LQPQQYINSGIEIPFCDDSEFLNR 619
           +Q Q+Y+N+   I +CD   FLNR
Sbjct: 668 VQHQEYLNTTALISYCD---FLNR 688


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,260
Number of Sequences: 2352
Number of extensions: 16491
Number of successful extensions: 83
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)