Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14o24
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple...    32   1.0  
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ...    32   1.0  
AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk i...    32   1.0  
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC...    32   1.0  
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB...    32   1.0  
AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA...    32   1.0  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   9.7  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   9.7  

>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
           isoform protein.
          Length = 1299

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 426


>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
           isoform protein.
          Length = 1029

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 156


>AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk
           isoform protein.
          Length = 963

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 90


>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
           isoform C protein.
          Length = 1299

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 426


>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
           isoform B protein.
          Length = 1029

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 156


>AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA,
           isoform A protein.
          Length = 963

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 477 PSGYGMSSPPRCFPSAMTCPSSNEACGEY*AVGSGLALPLALLKSMGDGNYSP 635
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L       Y P
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLP 90


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 707  ATVLGSIVFFIYCPCRQTSIRPT*W*VVTVAHGLQQCQGQSQAAAY 570
            AT L      IYC   + S     W   + +H  +QCQGQ   A Y
Sbjct: 2198 ATALSQYTTCIYCDSYKDS--SCLWEPTSASHRTRQCQGQCMTALY 2241


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 707  ATVLGSIVFFIYCPCRQTSIRPT*W*VVTVAHGLQQCQGQSQAAAY 570
            AT L      IYC   + S     W   + +H  +QCQGQ   A Y
Sbjct: 2161 ATALSQYTTCIYCDSYKDS--SCLWEPTSASHRTRQCQGQCMTALY 2204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,806,342
Number of Sequences: 53049
Number of extensions: 736238
Number of successful extensions: 1554
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)