Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o22
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 30 7.8
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 30 7.8
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 30 7.8
D87455-1|BAA13396.2| 772|Homo sapiens KIAA0266 protein. 30 7.8
BC122536-1|AAI22537.1| 766|Homo sapiens UTP14, U3 small nucleol... 30 7.8
BC105987-1|AAI05988.1| 662|Homo sapiens M-RIP protein protein. 30 7.8
BC089407-1|AAH89407.1| 766|Homo sapiens UTP14C protein protein. 30 7.8
BC075847-1|AAH75847.1| 832|Homo sapiens M-RIP protein protein. 30 7.8
BC009982-1|AAH09982.2| 842|Homo sapiens M-RIP protein protein. 30 7.8
AY296247-1|AAQ63176.1| 1024|Homo sapiens myosin phosphatase-Rho ... 30 7.8
AL834513-1|CAD39169.1| 987|Homo sapiens hypothetical protein pr... 30 7.8
AL139082-4|CAI12891.1| 766|Homo sapiens UTP14, U3 small nucleol... 30 7.8
AK092287-1|BAC03851.1| 586|Homo sapiens protein ( Homo sapiens ... 30 7.8
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 30 7.8
AB189741-1|BAD89507.1| 1036|Homo sapiens Rho interacting protein... 30 7.8
AB098507-1|BAC78198.1| 1037|Homo sapiens Rho-interacting protein... 30 7.8
AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein. 30 7.8
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 302 KNWTSCTLWLTISKIYSRER*QQNKHVRQNADKKKR-RPCHDVTRARRNKTPKKSLKSC- 129
K W TL K + E ++ V A KKK+ P R ++ PK+S KSC
Sbjct: 2547 KTWKERTLKREAHKQVTCENSPKSPKVTGTASKKKQITPSQCKERNLQDPVPKESPKSCF 2606
Query: 128 SSTRKLSLPS 99
+R SLPS
Sbjct: 2607 FDSRSKSLPS 2616
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -3
Query: 750 EKIXSSKRHVDEQRQPNKFSTKXINFLELSNVMTGVRNQ-NVQLLAALETAKDVILTRLN 574
+ + +SK +++ Q K + L+L +++Q VQ+ L+ K+ L
Sbjct: 867 DSLKNSKSEFEKENQKGKAA-----ILDLEKTCKELKHQLQVQMENTLKEQKE-----LK 916
Query: 573 TLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 460
L + ++ L L L+ + EQL++A NT++Q ++ E
Sbjct: 917 KSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEE 954
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -3
Query: 750 EKIXSSKRHVDEQRQPNKFSTKXINFLELSNVMTGVRNQ-NVQLLAALETAKDVILTRLN 574
+ + +SK +++ Q K + L+L +++Q VQ+ L+ K+ L
Sbjct: 867 DSLKNSKSEFEKENQKGKAA-----ILDLEKTCKELKHQLQVQMENTLKEQKE-----LK 916
Query: 573 TLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE 460
L + ++ L L L+ + EQL++A NT++Q ++ E
Sbjct: 917 KSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEE 954
>D87455-1|BAA13396.2| 772|Homo sapiens KIAA0266 protein.
Length = 772
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -3
Query: 321 FNEADRQKLDLVHTLVNDIKNILTGTLTTK*ACPTKRRQKKAAAMP*RYESAA*QNPQKK 142
FN + K + L+ ++ ++ + A + ++A A+ YE+ A + + K
Sbjct: 194 FNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMHRAELQRARALQSYYEAKARKEKKIK 253
Query: 141 SEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELERLEN 13
S+K Y K + + + + LQ + +E+E++EN
Sbjct: 254 SKK---YHKVVKKGKAKKALKEFEQLQKVNPTVALEEMEKIEN 293
>BC122536-1|AAI22537.1| 766|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog C (yeast) protein.
Length = 766
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -3
Query: 321 FNEADRQKLDLVHTLVNDIKNILTGTLTTK*ACPTKRRQKKAAAMP*RYESAA*QNPQKK 142
FN + K + L+ ++ ++ + A + ++A A+ YE+ A + + K
Sbjct: 188 FNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMHRAELQRARALQSYYEAKARKEKKIK 247
Query: 141 SEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELERLEN 13
S+K Y K + + + + LQ + +E+E++EN
Sbjct: 248 SKK---YHKVVKKGKAKKALKEFEQLQKVNPTVALEEMEKIEN 287
>BC105987-1|AAI05988.1| 662|Homo sapiens M-RIP protein protein.
Length = 662
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 371 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 413
>BC089407-1|AAH89407.1| 766|Homo sapiens UTP14C protein protein.
Length = 766
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -3
Query: 321 FNEADRQKLDLVHTLVNDIKNILTGTLTTK*ACPTKRRQKKAAAMP*RYESAA*QNPQKK 142
FN + K + L+ ++ ++ + A + ++A A+ YE+ A + + K
Sbjct: 188 FNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMHRAELQRARALQSYYEAKARKEKKIK 247
Query: 141 SEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELERLEN 13
S+K Y K + + + + LQ + +E+E++EN
Sbjct: 248 SKK---YHKVVKKGKAKKALKEFEQLQKVNPTVALEEMEKIEN 287
>BC075847-1|AAH75847.1| 832|Homo sapiens M-RIP protein protein.
Length = 832
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 554 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 596
>BC009982-1|AAH09982.2| 842|Homo sapiens M-RIP protein protein.
Length = 842
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 551 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 593
>AY296247-1|AAQ63176.1| 1024|Homo sapiens myosin phosphatase-Rho
interacting protein protein.
Length = 1024
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 746 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 788
>AL834513-1|CAD39169.1| 987|Homo sapiens hypothetical protein
protein.
Length = 987
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 709 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 751
>AL139082-4|CAI12891.1| 766|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog C (yeast) protein.
Length = 766
Score = 30.3 bits (65), Expect = 7.8
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -3
Query: 321 FNEADRQKLDLVHTLVNDIKNILTGTLTTK*ACPTKRRQKKAAAMP*RYESAA*QNPQKK 142
FN + K + L+ ++ ++ + A + ++A A+ YE+ A + + K
Sbjct: 188 FNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMHRAELQRARALQSYYEAKARKEKKIK 247
Query: 141 SEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELERLEN 13
S+K Y K + + + + LQ + +E+E++EN
Sbjct: 248 SKK---YHKVVKKGKAKKALKEFEQLQKVNPTVALEEMEKIEN 287
>AK092287-1|BAC03851.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ34968 fis, clone NTONG2004844, highly similar to
P116 RHO-INTERACTING PROTEIN. ).
Length = 586
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 540 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 582
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 30.3 bits (65), Expect = 7.8
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 302 KNWTSCTLWLTISKIYSRER*QQNKHVRQNADKKKR-RPCHDVTRARRNKTPKKSLKSC- 129
K W TL K + E ++ V A KKK+ P R ++ PK+S KSC
Sbjct: 2469 KTWKERTLKREAHKQVTCENSPKSPKVTGTASKKKQITPSQCKERNLQDPVPKESPKSCF 2528
Query: 128 SSTRKLSLPS 99
+R SLPS
Sbjct: 2529 FDSRSKSLPS 2538
>AB189741-1|BAD89507.1| 1036|Homo sapiens Rho interacting protein
protein.
Length = 1036
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 745 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 787
>AB098507-1|BAC78198.1| 1037|Homo sapiens Rho-interacting protein 3
protein.
Length = 1037
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 746 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 788
>AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein.
Length = 1402
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -3
Query: 150 QKKSEKLQQYKKAIAAEQTLRTTADVSSLQNHGESAVFQELER 22
Q++ EKL++ K + AE+T T + + +++N + +ELE+
Sbjct: 1111 QRELEKLREEKDRLLAEETAATISAIEAMKNAHREEMERELEK 1153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,368,286
Number of Sequences: 237096
Number of extensions: 1652321
Number of successful extensions: 4356
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4356
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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