Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o13
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 125 2e-28
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 124 3e-28
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 124 3e-28
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 124 3e-28
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 124 3e-28
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 124 3e-28
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 122 1e-27
AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding prot... 74 9e-19
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 34 0.62
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 34 0.62
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.62
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.62
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.62
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 34 0.62
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 3.3
M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyt... 31 4.4
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 5.8
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 5.8
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 5.8
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 5.8
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 5.8
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 5.8
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 5.8
AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase... 31 5.8
AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase... 31 5.8
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 5.8
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 5.8
BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein. 30 7.7
BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein. 30 7.7
AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B... 30 7.7
AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A... 30 7.7
AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepi... 30 7.7
AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein. 30 7.7
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 125 bits (301), Expect = 2e-28
Identities = 89/232 (38%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 517 RTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 574
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M +A KK ++G KGEADR + PKHL K
Sbjct: 575 RDVSGLRDVKMVKKAKTMKNA--QKKMNRLGKKGEADRHVFDMKPKHLLSGK 624
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 124 bits (299), Expect = 3e-28
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 517 RTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 574
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M A KK ++G KGEADR + PKHL K
Sbjct: 575 RDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 124 bits (299), Expect = 3e-28
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 398 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 457
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 458 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 514
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 515 RTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 572
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M A KK ++G KGEADR + PKHL K
Sbjct: 573 RDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPKHLLSGK 623
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 124 bits (299), Expect = 3e-28
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 517 RTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 574
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M A KK ++G KGEADR + PKHL K
Sbjct: 575 RDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens cDNA
FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 124 bits (299), Expect = 3e-28
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 517 RTV--LEKEMHSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 574
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M A KK ++G KGEADR + PKHL K
Sbjct: 575 RDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 124 bits (299), Expect = 3e-28
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHF--------TXXXXXXXXXXXXXXXXXXXREPSNQP 176
R+ L K+M LGVDM + DAH+ + S P
Sbjct: 517 RTV--LEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTP 574
Query: 175 -----VADPIMRVKVKRMAHAAIAKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
+ D M K K M A KK ++G KGEADR + PKHL K
Sbjct: 575 RDVSGLRDVKMVKKAKTMMKNA-QKKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 122 bits (295), Expect = 1e-27
Identities = 87/232 (37%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
D+E+E GDDY+LDL+K + + E++D IPEIWEGHNIADYIDP I
Sbjct: 400 DLELEMGDDYILDLQKYWDLMNLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEEL 459
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
A G Y + D+ + EIR+LA+QIR KK + ES+ K + P MPRT AK Q
Sbjct: 460 RTAAGEYDSVSESEDEEMLEIRQLAKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQ 516
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR- 155
R+ L K+M LGVDM + DAH+ PS+ + R
Sbjct: 517 RTV--LEKEMRSLGVDMDDKDDAHYA-VQARRSRSITRKRKREDSAPPSSVARSGSCSRT 573
Query: 154 ---------VKVKRMAHAAI---AKKTKKMGLKGEADRFIGTKMPKHLFRWK 35
VK+ + A + KK ++G KGEADR + PKHL K
Sbjct: 574 PRDVSGLRDVKMVKNAKTMMKNAQKKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding protein
protein.
Length = 562
Score = 74.1 bits (174), Expect(2) = 9e-19
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDI 551
D+E+E GDDY+LDL+K + + E+YD IPEIWEGHN+ADYIDP I
Sbjct: 439 DLELEMGDDYILDLQKYWDLMNSSEKYDKIPEIWEGHNVADYIDPAI 485
Score = 39.5 bits (88), Expect(2) = 9e-19
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -1
Query: 439 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 260
A+QIR KK + +S+ K + P MPRT AK QR+ L +M LGVDM + +AH
Sbjct: 488 AKQIREKKKLKILQSK-EKNTQGPRMPRT--AKKVQRAD--LENEMRSLGVDMDDKDNAH 542
Query: 259 F 257
+
Sbjct: 543 Y 543
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P + S GP+G R E E GP G GP
Sbjct: 1291 GEPGPSGRSGPPGPKGERGEKGESGPSGAAGP 1322
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 33.9 bits (74), Expect = 0.62
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 143 EDGPRGHRQEDQEDGPQGRGGP 78
E GP G R ED +GP+GRGGP
Sbjct: 784 EIGPPGPRGEDGPEGPKGRGGP 805
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 1245 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1276
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E GP+G R E E GP G GP
Sbjct: 44 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 75
>M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyte
surface protein exons 1-5, complete cds. ).
Length = 550
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 182 PAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 75
P G P + + PRG R+ + + +GRGGP+
Sbjct: 486 PRGPAPGRCPQGEPGPPRGRRRSQKRERERGRGGPM 521
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1145 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1176
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 176 GGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 75
G H RE +E G +G + E DGP GR GP+
Sbjct: 1313 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1345
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1222 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1253
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1273 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1304
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>AB212048-1|BAE46980.1| 116|Homo sapiens succinate dehydrogenase
complex, subunit C delta3+5 alternative splicing varian
protein.
Length = 116
Score = 30.7 bits (66), Expect = 5.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 505 PRAVPRPSPTLPVYQRCPGRY 567
PR P SP +PV+ CPG Y
Sbjct: 50 PRKRPEDSPAIPVWSGCPGSY 70
>AB211235-1|BAE46979.1| 150|Homo sapiens succinate dehydrogenase
complex, subunit C delta5 alternative splicing variant
protein.
Length = 150
Score = 30.7 bits (66), Expect = 5.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 505 PRAVPRPSPTLPVYQRCPGRY 567
PR P SP +PV+ CPG Y
Sbjct: 84 PRKRPEDSPAIPVWSGCPGSY 104
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 176 GGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 75
G H RE +E G +G + E DGP GR GP+
Sbjct: 1226 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1258
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 173 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
G P E+ GP+G R E E GP G GP
Sbjct: 472 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 503
>BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein.
Length = 1797
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 454 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 278
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 277 ET 272
ET
Sbjct: 185 ET 186
>BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 QDRAGRHREG---DQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQ 312
++R R EG ++ G + + P G S G A EA + HLA + AE +A
Sbjct: 93 EERRERSPEGPREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAA 152
Query: 311 EGHGETRRGHVGD 273
+G G +
Sbjct: 153 RVNGRREDGEASE 165
>AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B
protein.
Length = 704
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 QDRAGRHREG---DQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQ 312
++R R EG ++ G + + P G S G A EA + HLA + AE +A
Sbjct: 371 EERRERSPEGPREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAA 430
Query: 311 EGHGETRRGHVGD 273
+G G +
Sbjct: 431 RVNGRREDGEASE 443
>AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A
protein.
Length = 686
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 482 QDRAGRHREG---DQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAEVHLQAQ 312
++R R EG ++ G + + P G S G A EA + HLA + AE +A
Sbjct: 371 EERRERSPEGPREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAA 430
Query: 311 EGHGETRRGHVGD 273
+G G +
Sbjct: 431 RVNGRREDGEASE 443
>AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepine
receptor interacting protein protein.
Length = 1857
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 454 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 278
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 277 ET 272
ET
Sbjct: 185 ET 186
>AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein.
Length = 1810
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 454 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 278
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 138 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 197
Query: 277 ET 272
ET
Sbjct: 198 ET 199
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,525,142
Number of Sequences: 237096
Number of extensions: 1552752
Number of successful extensions: 8854
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8770
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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