Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o13
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p pro... 191 1e-48
AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD2383... 191 1e-48
AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA ... 191 1e-48
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA... 30 3.9
L31626-1|AAA21800.1| 416|Drosophila melanogaster homeodomain-co... 29 6.7
BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p pro... 29 6.7
AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA... 29 6.7
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 29 8.9
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro... 29 8.9
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P... 29 8.9
AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA... 29 8.9
>BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p
protein.
Length = 461
Score = 191 bits (465), Expect = 1e-48
Identities = 110/252 (43%), Positives = 142/252 (56%), Gaps = 23/252 (9%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
+IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 211 EIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGL 270
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
G+Y P + +D+T++EIRE+A+QIR K+ L+DE RL + KPV+PR + K +
Sbjct: 271 REESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRD 330
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR- 155
RS KL ME LGVDMS + +A+FT +P + ++R
Sbjct: 331 RSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRK 390
Query: 154 --VKVKR--------MAHAAIAKKTKKM------------GLKGEADRFIGTKMPKHLFR 41
+KR + + AI KK + M GLKGEADRFIGTKMPKHLF
Sbjct: 391 TGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFS 450
Query: 40 WKXVGSARRXRR 5
K G+ + RR
Sbjct: 451 GKR-GNGKTDRR 461
>AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD23830
protein.
Length = 652
Score = 191 bits (465), Expect = 1e-48
Identities = 110/252 (43%), Positives = 142/252 (56%), Gaps = 23/252 (9%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
+IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 402 EIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGL 461
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
G+Y P + +D+T++EIRE+A+QIR K+ L+DE RL + KPV+PR + K +
Sbjct: 462 REESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRD 521
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR- 155
RS KL ME LGVDMS + +A+FT +P + ++R
Sbjct: 522 RSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRK 581
Query: 154 --VKVKR--------MAHAAIAKKTKKM------------GLKGEADRFIGTKMPKHLFR 41
+KR + + AI KK + M GLKGEADRFIGTKMPKHLF
Sbjct: 582 TGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFS 641
Query: 40 WKXVGSARRXRR 5
K G+ + RR
Sbjct: 642 GKR-GNGKTDRR 652
>AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA
protein.
Length = 652
Score = 191 bits (465), Expect = 1e-48
Identities = 110/252 (43%), Positives = 142/252 (56%), Gaps = 23/252 (9%)
Frame = -1
Query: 691 DIEVEXGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIADYIDPDIFXXXXXXXXXXXX 512
+IE E GDDY LDLKKNY+EIPE+ERYD+IPE W+GHNIADYID DIF
Sbjct: 402 EIEEEMGDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGL 461
Query: 511 XXAGGMYAAPKIELDDTVREIRELARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQ 332
G+Y P + +D+T++EIRE+A+QIR K+ L+DE RL + KPV+PR + K +
Sbjct: 462 REESGVYKVPDMTMDETLKEIREIAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRD 521
Query: 331 RSTSKLRKDMEKLGVDMSETGDAHFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR- 155
RS KL ME LGVDMS + +A+FT +P + ++R
Sbjct: 522 RSVQKLVSTMEGLGVDMSGSENANFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRK 581
Query: 154 --VKVKR--------MAHAAIAKKTKKM------------GLKGEADRFIGTKMPKHLFR 41
+KR + + AI KK + M GLKGEADRFIGTKMPKHLF
Sbjct: 582 TGQPLKRAPSRDTLGIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFS 641
Query: 40 WKXVGSARRXRR 5
K G+ + RR
Sbjct: 642 GKR-GNGKTDRR 652
>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
protein.
Length = 2267
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 188 LQPAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPVHRHQDAEA 51
L P+G H + ++ GP+ + + Q+ GP R H+ +A
Sbjct: 424 LSPSGNANHLYTQQQQQGPQQQQPQQQQQGPPHRFQQQHQQMSPQA 469
>L31626-1|AAA21800.1| 416|Drosophila melanogaster
homeodomain-containing protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -3
Query: 503 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 381
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -3
Query: 503 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 381
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA
protein.
Length = 416
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -3
Query: 503 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 381
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 28.7 bits (61), Expect = 8.9
Identities = 38/155 (24%), Positives = 50/155 (32%), Gaps = 21/155 (13%)
Frame = -3
Query: 482 QDRAGRHREGDQGTG------PADTQQEGHPQGRVS---------PG--EAVHEAGDAAH 354
Q + G H++G QG P QQ GH QGR PG + H+ G
Sbjct: 116 QGQQGGHQQGRQGQDGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQ 175
Query: 353 LASQDQAEVHLQAQEGHGETRRGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAG 174
Q Q Q GH + R+G GD
Sbjct: 176 EGGYQQRPSG-QQQGGHQQGRQGQEGDYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQ 234
Query: 173 GRPHHARESKEDG----PRGHRQEDQEDGPQGRGG 81
G R+ +E G P G +Q + G QG+ G
Sbjct: 235 GGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEG 269
>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
protein.
Length = 1398
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 440 GPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAE 330
GP D + EGH G S +A +A A L ++ Q +
Sbjct: 28 GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64
>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
isoform A protein.
Length = 1398
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 440 GPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAE 330
GP D + EGH G S +A +A A L ++ Q +
Sbjct: 28 GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64
>AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA
protein.
Length = 119
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 182 PAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 78
P GG + + GP+G Q + GP G GGP
Sbjct: 42 PQGGPQGGPQGGPQGGPQGGPQGGPQGGPGGPGGP 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,831,670
Number of Sequences: 53049
Number of extensions: 482231
Number of successful extensions: 2563
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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