Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o11
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 38 0.009
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 35 0.081
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 33 0.25
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 33 0.33
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 32 0.43
07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 32 0.57
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 31 0.76
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 1.3
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 30 1.7
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 30 2.3
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 30 2.3
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 30 2.3
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 29 3.1
01_01_0472 - 3473096-3474288,3474833-3474938 29 3.1
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 4.0
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 5.3
04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954... 29 5.3
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 28 7.1
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379 28 7.1
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087... 28 7.1
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 28 7.1
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 28 9.3
05_01_0488 - 4070506-4072277,4072455-4072557 28 9.3
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Frame = -2
Query: 271 DTMLSESQAILKKLQIDIAEQTQL-------NIKRQLDLNKLQQTSVFMQEKLDRIKNDY 113
++ LS++Q LKKL ++A + Q N + Q +L L Q QE+L++ + +
Sbjct: 488 ESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSELEALDQKVKMQQEELEQKQKEL 547
Query: 112 NNMHKSFKELQLKRISTEKALKSLNDDYAK 23
+ + +F+E Q KR+ E AL S + A+
Sbjct: 548 KSFNLTFQEEQDKRLQAESALLSEGKELAQ 577
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 34.7 bits (76), Expect = 0.081
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = -2
Query: 355 DAASLASVLFEKSLLD---DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQ 185
D SL VL E D A+ + L E KKL++D + L +K Q
Sbjct: 261 DRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQ 320
Query: 184 LDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND 35
+ ++L+ +++D+ K+D + K LQ + +A+ LN+
Sbjct: 321 I--SRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQSALVDVTRAIDELNE 368
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/99 (23%), Positives = 45/99 (45%)
Frame = -2
Query: 322 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQ 143
K DD+ D N + +L+E Q++ ++ I+ ++Q K + +++ L+ T +
Sbjct: 407 KGKKDDSNDIMNLQHEVSKLLTERQSLKEQ----ISSESQRANKAESEIHSLKDTISCLI 462
Query: 142 EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 26
+ D YN + L+ + LK L+DD A
Sbjct: 463 SEKDTTLLQYNESTRRLSVLECEISKAHMELKKLSDDMA 501
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Frame = -2
Query: 325 EKSLLDDAEDSNNAANSDDTMLS-ESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVF 149
E S+L E + N D + E+Q + KLQ+D + N+K +L+ + Q+ +
Sbjct: 806 ELSMLQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVELK 865
Query: 148 MQ-----EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 2
+Q + +K++ + EL+ ++ + + L + +D L NA+
Sbjct: 866 LQMDESRSLITNLKDELEQVEAQKVELKENQLESHRRLSEVQEDSEALRRSNAK 919
>03_06_0331 -
33181757-33181795,33182325-33182453,33182941-33182967,
33183459-33183545,33183827-33183975,33185467-33185521,
33185596-33187584,33188705-33188782
Length = 850
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -2
Query: 361 NFDAASLASVLFEKSL-LDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQ 185
+ +A + +V F + L + +D N+ D + +++ A + + + D++ L K
Sbjct: 30 SLEALAKGAVCFSRKFTLKEIQDRWNSLLYDPEISTQASARMVEYENDLSTSNPLKAKV- 88
Query: 184 LDLNKLQQTSVFMQEKLDRIKNDYNNMHK 98
+N Q+ F + K+D +KN Y M K
Sbjct: 89 --INAKQKDLSFQKRKIDSVKNQYYAMRK 115
>07_03_1576 -
27862043-27862129,27862935-27862988,27863042-27863243,
27865015-27865249,27865338-27865404,27865489-27865639,
27866898-27866957,27867402-27867466
Length = 306
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = -2
Query: 547 LDTCKHQLCSMCXXXXXXXXXIPCPLCR-----VESLHFNVYSINRNVVDV 410
L TC H +C C CP CR V S +Y+ NR++VD+
Sbjct: 178 LPTCSHAMCIKCYRDWRSRSQS-CPFCRDSLKRVNSADLWIYTDNRDIVDI 227
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 31.5 bits (68), Expect = 0.76
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = -2
Query: 319 SLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQE 140
S L++A D ++ D S + ++L++++ + L+ + QL++ +Q S ++
Sbjct: 791 SALEEAGDDGHSIV--DAAESRWITLTEELRVELEKSKSLSERLQLEVESEKQCSEELKG 848
Query: 139 KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND---DYAKLAAK 11
L+ + + + + ELQ K S +++ND D K AAK
Sbjct: 849 ALEMAMQGHARILEQYCELQEKHASLLSMCRTINDGIEDVKKEAAK 894
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = -2
Query: 277 SDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK 98
S + L++S++ + KL +++ E ++N L ++KLQ MQE L + ++ K
Sbjct: 509 STEEALTDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSK 568
Query: 97 SFKE 86
+ +
Sbjct: 569 ALSD 572
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 30.3 bits (65), Expect = 1.7
Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Frame = -2
Query: 460 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAA 281
E L + S+++ + +K ++SV + N + ASL L ++ +A S
Sbjct: 153 EKLQKEISSLSQENQE-LKKKISSVLE-NSDRAESEVASLKEALAQQEAEKEAAFSQCQQ 210
Query: 280 NSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNK-----LQQTSVFMQEKLDRIKND 116
+SD +S+ + + + ++ N L + L++ + + +LD++KND
Sbjct: 211 SSDRLQALKSEILQTQEEFKRLKEEMQNGLENLSTAEERCLLLERANQNLYSELDKLKND 270
Query: 115 YNNMHKSF--KELQLKRIS---TEKALKSLNDDYAKLA 17
H K ++L+++S E+ LKS+ + +L+
Sbjct: 271 SKERHGELNEKHVELEKLSISIQEEQLKSMQAEMTRLS 308
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 187 QLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALK 47
Q D K Q+ +++LD+ K +YN + K+ EL+ + E L+
Sbjct: 981 QEDYKKTQEMMDNHKDELDKTKVEYNKLKKAMDELRSSEVDVEYKLQ 1027
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -2
Query: 220 IAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 41
I+E+ N + DLNKL ++EK++ K Y + + +++ +K ++S+
Sbjct: 772 ISEEAVANAEN--DLNKLVDQLNRLREKINDAKKGYRALEDAKSRFEMELAKAKKEVESM 829
Query: 40 NDDYA 26
N ++
Sbjct: 830 NAQFS 834
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/103 (22%), Positives = 46/103 (44%)
Frame = -2
Query: 343 LASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQ 164
+A+ EKSL ++ E A N ++ LSE L++ +I + +Q Q L L+
Sbjct: 625 IATTEIEKSLREEKEKLLGALNEANSALSEKNCELRQSEIILHQQKQA-------LEHLE 677
Query: 163 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND 35
+ V M+ ++ ++ + + + +I EK N+
Sbjct: 678 ELRVNMETEIKGYIDEICVLKRDLDATHMAKIEAEKTYSEENE 720
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/101 (24%), Positives = 43/101 (42%)
Frame = -2
Query: 322 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQ 143
KS + + N A + L E+ A + I Q Q + R L L+ + Q
Sbjct: 138 KSRISSLLEQTNKAELEVVCLKEALAQQNTEKEAIVLQCQQSTAR---LQNLKSEILHTQ 194
Query: 142 EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 20
EK +R+K + + + F + + EKA + +N + KL
Sbjct: 195 EKFNRLKEEMQSGFQPFTTADERSVLLEKANQEMNLELNKL 235
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = -2
Query: 199 NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 20
+++R L N+ Q+ +QE++ ++K++ NN++ + + + E AL ++DY L
Sbjct: 397 DLERVLLSNRKQEG--LLQEEIQKLKDEINNLNSYIESRKSESSKLESALAKKHNDYNDL 454
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/112 (20%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = -2
Query: 325 EKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLN----KLQQT 158
E +++ E+ + + LS S A + K + ++A+ ++ ++ +L + +LQ+T
Sbjct: 272 EAEIVNLKEEIASDRQQYEEKLSRSDAEIDKCRQELADASEKLLQEKLSNSSVTAELQET 331
Query: 157 SVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 2
++ KL+ + + + FK+L+ EK + L+ KL+ + R
Sbjct: 332 IESIRIKLEEVSEEKLLVENKFKQLEEANSEAEKYNQELSHATEKLSEEKFR 383
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Frame = -2
Query: 262 LSESQAILKKLQIDIAEQTQLNIKRQLDLN-----KLQQTSVFMQEKLDRIKNDY----- 113
L++ +A LK +ID + +NIKR+LD + +L + + ++L+ +K+
Sbjct: 1428 LNDVEASLKS-EIDRHRKININIKRKLDASAKEKEELTKEKQSLSKQLEDLKSSQKTTTE 1486
Query: 112 NNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 2
N+ ++ KE + + EK L+ DD K A R
Sbjct: 1487 NSNEQAIKEKDFRIQTLEKVLEKERDDNKKEKAFRRR 1523
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = -2
Query: 184 LDLNKLQQTSVFMQ--EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDY--AKLA 17
L+L + ++MQ +L + +D++ E QL + E LKSLND + +K A
Sbjct: 732 LNLQLSNKNDMYMQLESQLSQAGDDHSKTRSLLSEAQLHKEELELNLKSLNDLHVESKTA 791
Query: 16 AKNA 5
A++A
Sbjct: 792 AESA 795
>04_03_0103 +
11288977-11290353,11291962-11292075,11294987-11295436,
11295813-11295910,11296023-11296206,11296979-11297068,
11301608-11301727,11301812-11302054,11302715-11302988,
11303237-11303357,11303591-11303849
Length = 1109
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 622 CFSVAEIKNYFMQPIDRLTIIPVLELDTCK 533
CFS N++M+PI+ LT++ +++DT +
Sbjct: 237 CFSTEGTANFYMRPIEGLTVL--VDMDTAE 264
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/112 (23%), Positives = 47/112 (41%)
Frame = -2
Query: 361 NFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQL 182
NFD+A ++ LDD +SN MLS Q ++++ + Q + ++RQL
Sbjct: 673 NFDSAERRPQYVQQRGLDDTINSN--------MLSARQQFQRQVERQLQRQLERQLQRQL 724
Query: 181 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 26
+ +Q +Q +R + E ++ TE+ L + D A
Sbjct: 725 ERQLQRQVQRQLQRHHERAAASEAHPFYGNDETSVRMNPTEEFLDIVKDHEA 776
>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
Length = 881
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 379 WNKINDNFDAASLASVL----FEKSLLDDAEDSNNAANSDD 269
+NKI D FD ++ SV +K L D +D + NSDD
Sbjct: 211 YNKIKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDD 251
>03_05_0407 -
23906388-23906966,23907028-23907915,23908141-23908753,
23908858-23909021
Length = 747
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 175 NKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 77
N+L+QT V + ++L + DY+ H + ++ QL
Sbjct: 715 NRLRQTRVPVHQRLGPVNQDYDQEHDNSRKTQL 747
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 148 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 20
+QE++ ++K+ NN++ F+ + + E AL + DY L
Sbjct: 311 LQEEIQKLKDKINNLNSYFEFYESESNKLESALAKKHSDYNDL 353
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 27.9 bits (59), Expect = 9.3
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = -2
Query: 370 INDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQL--N 197
IN N + V + LLDD A DD + + + + QT L +
Sbjct: 176 INTNDKELRVIGVWRKNGLLDDKSIIRRAY--DDLKMRKFECYAWIRLKSLCNQTWLLQS 233
Query: 196 IKRQLDLNKLQQTSVFMQEK---LDRIKNDYNNMHK 98
I RQL N LQ+T F E +DRI NM +
Sbjct: 234 ISRQLYENSLQETREFKMEATDLVDRILQKMGNMEE 269
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 27.9 bits (59), Expect = 9.3
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Frame = -2
Query: 466 RVESLHFNVYSINRNVVDVIKCSVT---SVAQWNKINDNFDAASLASVLFEKSLLDDAED 296
RVE L +V S N +V +++ + A+ K++ + + FE+ LL D E+
Sbjct: 335 RVEELEQSVNSSNYSVSEMVNLQELMKDTQAELEKVSQEKEVLRERVLEFEQ-LLGDFEN 393
Query: 295 SN-NAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSV---FMQEKLDR 128
S A +T+ + I LQ Q ++ Q + LQ S+ + +L +
Sbjct: 394 SGMEVAKLPETIKNLGAQIEGTLQEKSVLQDRIKELEQAVHDSLQNHSLEKSSLSAELSK 453
Query: 127 IKNDYNNMHKSFK--ELQLKRISTEKALKSLNDD 32
+ ++ E +LK++ EKA +SLN +
Sbjct: 454 LSEANASLEAKLASVEAELKQVYDEKANESLNSE 487
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,092
Number of Sequences: 37544
Number of extensions: 261437
Number of successful extensions: 850
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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