Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o08
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 30 0.60
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 29 1.1
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 29 1.4
03_03_0126 + 14665374-14665539,14665790-14666127 29 1.4
08_01_0490 + 4284192-4284740 28 1.8
05_02_0105 + 6644264-6644344,6645573-6646097,6646185-6646410,664... 28 1.8
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654... 28 1.8
03_01_0291 - 2250349-2250966,2251062-2251444,2251604-2251981,225... 28 1.8
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 28 1.8
08_01_0842 - 8252232-8253155 28 2.4
04_04_0479 - 25524753-25525426,25525736-25525819,25526255-255264... 28 2.4
03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157... 28 2.4
10_08_0798 + 20649370-20649428,20649515-20649719 27 3.2
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 27 3.2
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 27 4.2
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 27 4.2
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 27 5.6
12_01_0135 + 1042889-1044255,1045368-1045809 27 5.6
11_04_0117 + 13610168-13610752,13622181-13622240,13622241-13622534 27 5.6
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 27 5.6
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 27 5.6
06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-47... 27 5.6
05_05_0210 - 23285241-23285338,23286297-23286447,23286660-232867... 27 5.6
03_06_0264 + 32738224-32738553,32739298-32739768,32739864-327400... 27 5.6
03_02_0411 + 8217324-8218172 27 5.6
12_02_0227 - 15894357-15894494,15894587-15894655,15894837-158949... 26 7.4
11_04_0250 + 15335457-15335882 26 7.4
08_02_0457 + 17377254-17377608,17377701-17377750,17380018-17380188 26 7.4
06_02_0085 + 11555539-11555632,11555767-11555867,11556947-115570... 26 7.4
04_04_0733 + 27639581-27641257 26 7.4
03_06_0361 + 33377781-33378458 26 7.4
02_05_1045 + 33739287-33739991 26 7.4
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 26 7.4
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820... 26 7.4
01_03_0270 + 14445240-14445464,14445490-14445655,14446193-144463... 26 7.4
01_01_0595 - 4430738-4430785,4430904-4432679 26 7.4
12_01_0778 + 7111562-7112152,7113034-7113157,7113252-7113395,711... 26 9.8
11_06_0232 + 21559467-21559532,21559586-21560200 26 9.8
09_02_0082 - 4060018-4061604 26 9.8
08_02_0329 - 15833124-15833825 26 9.8
08_01_0310 + 2714773-2715309,2716426-2716650 26 9.8
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590... 26 9.8
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 26 9.8
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 26 9.8
05_07_0176 - 28168595-28169806 26 9.8
05_01_0368 + 2892476-2893465 26 9.8
04_04_0247 + 23888251-23888551,23889804-23890186 26 9.8
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 26 9.8
02_04_0270 - 21439788-21441680 26 9.8
>11_01_0110 +
850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 29.9 bits (64), Expect = 0.60
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 22 VFSFDYFLLTLQV-QRVPSPGYLRLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPP 198
+FS + F+ ++Q+ Q+VP P YL+ P + H H +L P RPN PP
Sbjct: 28 LFSPENFIRSIQMPQKVPLPCYLQSPPSAPHPRHSAAFSRSLR--------PCRPNGPPP 79
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 115 IGAHRCSEDGDT--QGRVPAVLAALTKSNQN*TQKINPT 5
+G H C ED QG AV A LTK + + T I+PT
Sbjct: 484 VGVHMCGEDAPEIIQGVAIAVKAGLTKQDFDATIGIHPT 522
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 167 CAPAGPI*SRRMPNTSRIDRSMKNSERRTISPKAYTFIISFLKASA 304
CAP SRR + S ++S RT+SP A+ +++ + S+
Sbjct: 1333 CAPGDDAWSRRATVIVPVPASCRSSSCRTLSPVAFAVLLTVTQGSS 1378
>03_03_0126 + 14665374-14665539,14665790-14666127
Length = 167
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 263 WVK*FCVRSSSSTGRSGKCWACGGSRLGRPGHIHRCSHQCRV--VGPCKGWDWC 108
W+K S++ TG G+ GG R+ + GH+H H CR+ + KG D C
Sbjct: 52 WLK--ATFSTTVTGFGGE----GGRRMQKKGHLHHHRHCCRLADLEEEKGEDEC 99
>08_01_0490 + 4284192-4284740
Length = 182
Score = 28.3 bits (60), Expect = 1.8
Identities = 25/75 (33%), Positives = 27/75 (36%)
Frame = -2
Query: 262 G*NSSAFGVLHRPVDPGSVGHAAALDWAGRGTFIDVATSVGWWAPVRGGIGAHRCSEDGD 83
G S VL RP PG G GRG V +V AP R G A +G
Sbjct: 113 GNGSKTNAVLRRPTPPGGAGPR-----EGRGGRGGVIHAVADSAPQRPGSPAEGAGGNGG 167
Query: 82 TQGRVPAVLAALTKS 38
PA AA S
Sbjct: 168 AVHAAPAAAAAAASS 182
>05_02_0105 +
6644264-6644344,6645573-6646097,6646185-6646410,
6646498-6646875,6647035-6647417,6647513-6648130
Length = 736
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 194 GSRLGRPGHIHRCSHQCRVVGPCKGWDWCAPVLGRRRYPGEGTRCTCSVN---KK*SKLN 24
G R+ R +HR C+ + W W LG+ Y + T C +++ K+ +KL
Sbjct: 478 GLRVNR-SQVHRHFRLCK-----EKWSWICAALGKSGYGFDATSCKFNIDPSEKEANKLG 531
Query: 23 TENKPYL 3
T YL
Sbjct: 532 TTKYNYL 538
>03_02_0222 +
6540095-6540099,6541215-6541339,6541440-6541766,
6541815-6543215,6543268-6543357,6543800-6544515,
6545549-6545707,6545877-6546186,6546794-6546861,
6547354-6547896
Length = 1247
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -1
Query: 245 VRSSSSTGRSGKCWACGGSRLGRPGHIHRCSHQCRVVGPCKGWDWCAPVLGRRRYPGEGT 66
+ + SS G SG C + PG I+ C WC+P RRR +GT
Sbjct: 148 IYAESSDGTSGNCRINSLIAVAVPGGINECIVIASQPTGTLWMFWCSPAAVRRREIHKGT 207
>03_01_0291 -
2250349-2250966,2251062-2251444,2251604-2251981,
2252147-2252294,2252382-2252906,2253990-2254112,
2254151-2254205,2254510-2254640
Length = 786
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 194 GSRLGRPGHIHRCSHQCRVVGPCKGWDWCAPVLGRRRYPGEGTRCTCSVN---KK*SKLN 24
G R+ R +HR C+ + W W LG+ Y + T C +++ K+ +KL
Sbjct: 528 GLRVNR-SQVHRHFRLCK-----EKWSWICAALGKSGYGFDATSCKFNIDPSEKEANKLG 581
Query: 23 TENKPYL 3
T YL
Sbjct: 582 TTKYNYL 588
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 260 PKAYTFIISFLKASAVNKNSAARKLRH 340
P AY FI+ +LKA A N + +++ H
Sbjct: 322 PTAYVFIMRYLKAGASADNKSDKEMEH 348
>08_01_0842 - 8252232-8253155
Length = 307
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 51 AASTAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAA 200
AA A SPSS P+PP+T + + +++ PA+ AA+
Sbjct: 100 AAEAAAAAASASPSSSPVSPPLPPVTTQPAAAVKSLTLDFTNPAKVAAAS 149
>04_04_0479 -
25524753-25525426,25525736-25525819,25526255-25526483,
25526910-25527357,25528462-25528569,25528681-25528806,
25528887-25528981,25529062-25529147,25529253-25529408,
25529523-25529766
Length = 749
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 66 GTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAA 197
G W SP + HR +P PP TG + + R A SR A
Sbjct: 306 GRFLWASPCAGHRLSP-PPSTGHARAIKGESEHTMLRAAASRCA 348
>03_06_0636 -
35215034-35215336,35215417-35215584,35215599-35215799,
35215877-35215962,35216037-35216229,35216304-35216489
Length = 378
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = -2
Query: 331 LPRG*VLVDCGRF*KRDDESICLG*NSSAFGVLHRPVDPGSVGHAAALDWAGRGTFIDVA 152
L G VLV K DD +G S FG L+ V+ S+GH + AG
Sbjct: 95 LGAGQVLVIAADVVKEDDCRRLVGDTISFFGQLNHLVNTVSLGHDFCFEEAGDTVAFPHL 154
Query: 151 TSVGWWAPV 125
V +W V
Sbjct: 155 MDVNFWGNV 163
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 158 CSHQCRVVGPCKGWDWCAPVLGRRRYPGEGTRCTC 54
C +C PC G C R G+ T C+C
Sbjct: 3 CDDKCGCAVPCPGGTGCRCASSARSGGGDHTTCSC 37
>10_08_0584 +
18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +3
Query: 171 PRPAQSRAA---ACPTLPGSTGR*RTPNAELFHPR 266
PRP +RA ACPT+PG+ P A PR
Sbjct: 842 PRPPTTRAGPLPACPTVPGAPDPQDGPGATAGRPR 876
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 75 PWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAA 200
P + P S + +P PP HP L P P SR +A
Sbjct: 54 PELMPPSPPKASPTPPPQPQPHPQLQPPPPPAPLPPPSRRSA 95
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 54 ASTAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 215
++ A PS H A + L G+ P + +S ++P PA AAA P P
Sbjct: 98 SAAAAAAAAAGPSQNHG-ARLMQLLGSSGPAHLDSSASMPPPASEFAAAQPPQP 150
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +3
Query: 111 PIPPLTGAHHPTL--VATS---MNVPRPAQSRAAACPTL 212
P P GAHHP AT + +P P + RA A P L
Sbjct: 9 PAAPRAGAHHPRRPNPATGLLRLRLPAPPRRRARAAPRL 47
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 111 PIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 215
P PP HP L+ P P + AA P P
Sbjct: 134 PAPPPPPPSHPALLPPDATAPPPPPTSVAALPPPP 168
>11_04_0117 + 13610168-13610752,13622181-13622240,13622241-13622534
Length = 312
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 STAGTLPWVSPSSEHRCAPIPPLTGAHHPTLV-ATSMNVPRPAQSRAAACPTL 212
S +G+ + P S P+PPLT L+ + +P S AA C L
Sbjct: 81 SASGSTYLLDPQSRQDKIPLPPLTRIDDDVLMDCNCLLSDQPTASAAAGCVVL 133
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 117 PPLTGAHHPTLVATSMNVPRPAQSRA-AACPTLPGS 221
PP G ++P A + P PA S A AA PT+P S
Sbjct: 11 PPAAGHYYPHQFAPNPP-PHPASSAADAAPPTIPAS 45
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 26.6 bits (56), Expect = 5.6
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 60 TAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSM-NVPRPAQSRAA 197
TA P S S+E R P PP H P+ A + RPA + AA
Sbjct: 222 TAAAEPSSSASAERR-EPPPPAPDEHQPSAAAREVAEGKRPAAAEAA 267
>06_01_0056 -
478424-478491,478587-478821,478916-478978,479102-479179,
479263-479354,479788-479866,479971-480104,480184-480523
Length = 362
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 51 AASTAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACP 206
+ S A + SPS H P PP T A H + V + AA P
Sbjct: 10 STSAAAAVTKASPSPAHCFLPCPPRTRAAHQRGLLLRAQVSTTDAAAVAAAP 61
>05_05_0210 -
23285241-23285338,23286297-23286447,23286660-23286748,
23287108-23288394,23288460-23288516,23289446-23289644,
23290240-23290342,23291048-23291229,23291850-23291899,
23292192-23292360
Length = 794
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 88 RLPSTGAHQSHPLQGPTTLHWWLHR*MCPGRPNLEPP 198
RL GAH L+G H L R + G P PP
Sbjct: 61 RLEGAGAHSGDLLEGGGHYHVGLGRRLLSGGPGSHPP 97
>03_06_0264 +
32738224-32738553,32739298-32739768,32739864-32740007,
32740570-32740671,32741758-32741873,32741959-32742028,
32742308-32742376,32742898-32742948,32743038-32743196
Length = 503
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 147 LVATSMNVPRPAQSRAAACPT 209
L A+ + +PRPA+S AAA P+
Sbjct: 16 LTASRLRLPRPARSPAAATPS 36
>03_02_0411 + 8217324-8218172
Length = 282
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 172 PGRPNLEPPHAQHFPD 219
PGRP+L PP ++H P+
Sbjct: 6 PGRPSLPPPPSRHRPN 21
>12_02_0227 -
15894357-15894494,15894587-15894655,15894837-15894902,
15895130-15895219,15895312-15895408,15896449-15896771
Length = 260
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 242 RSSSSTGRSGKCWACGGS 189
RS S G+CW+CG S
Sbjct: 64 RSLSDRAGGGECWSCGAS 81
>11_04_0250 + 15335457-15335882
Length = 141
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 75 PWVSPSSEHRCAPIPPLTGAHHPT 146
PW P SEH PI L H PT
Sbjct: 111 PWAEPHSEHSVQPIVTLI-LHGPT 133
>08_02_0457 + 17377254-17377608,17377701-17377750,17380018-17380188
Length = 191
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 242 ERRTISPKAYTFIISFLKASAVNKNS 319
ERR ++P A FIIS K SA+++ +
Sbjct: 16 ERRPLNPSAKGFIISLGKHSAISQGT 41
>06_02_0085 +
11555539-11555632,11555767-11555867,11556947-11557056,
11557152-11557227,11557412-11557555,11558432-11558503,
11558601-11559470
Length = 488
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 196 PHAQHFPDRPVDEELRTQNYF---TQGIYFHHLVFKSVRSQQELSREEVAT*RS 348
PH H P ++ + +QNY+ T +++ F+S S Q+ S V T +S
Sbjct: 331 PHTYHQPPYTIEPQHTSQNYYSTETPAAPYNYSNFQSYPSFQDSSVPSVPTHQS 384
>04_04_0733 + 27639581-27641257
Length = 558
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 78 WVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRA-AACPTLPGS 221
W++ SS A +PPL P ++ P PA + AA P L S
Sbjct: 406 WLTSSSADHTASVPPLADDLVPLSFRPMLDAPEPALDLSIAANPPLLAS 454
>03_06_0361 + 33377781-33378458
Length = 225
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 168 VPRPAQSRAAACPTLPG 218
VPR + AAACP PG
Sbjct: 38 VPRAGDAAAAACPAYPG 54
>02_05_1045 + 33739287-33739991
Length = 234
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +3
Query: 123 LTGAHHPTLVATSMNVPRPAQSRAA---ACP 206
L+G HPTLV + +PR R A CP
Sbjct: 16 LSGGDHPTLVGVPLPLPRRLVDRGAEVEGCP 46
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 26.2 bits (55), Expect = 7.4
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 STAGTLPWVSPSSEHRCAPIPPLTGAHHPT-LVATSMNVPRPAQSRAAACPTLPGSTGR* 233
+T+ LP + + P A HP + + +P P AA+ P LP S+
Sbjct: 164 TTSLLLPSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPCR 223
Query: 234 RTPNA 248
R+P A
Sbjct: 224 RSPPA 228
>01_06_1201 -
35380338-35380496,35381200-35381322,35381521-35382066,
35382285-35382392,35382695-35383225,35383614-35383743,
35384225-35385081,35385303-35385408,35387119-35387230,
35389255-35389347,35389723-35389771,35389859-35389897,
35390671-35390757,35391613-35391873,35391957-35392166,
35392413-35393507
Length = 1501
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 75 PWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLP 215
P +P S AP P GA P L M P P ++ AC +P
Sbjct: 750 PQAAPCSLSGLAPFPLAAGASAPRLRLRRMLPPAPTRN-PGACRFIP 795
>01_03_0270 +
14445240-14445464,14445490-14445655,14446193-14446341,
14446634-14446674,14447683-14447755
Length = 217
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -2
Query: 142 GWWAPVR--GGIGAHRCSEDG 86
GWW PVR G G+ R ++DG
Sbjct: 156 GWWDPVRIEGAAGSGREADDG 176
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 AASTAGTLPWVS-PSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLPGSTG 227
AA A P + P + AP PP A P A S ++P PA+ R +A +
Sbjct: 135 AADKAAISPSIPVPVRKRVHAPQPPPAPA--PEKAAVSPSIPVPAKKRVSATAAAAATDA 192
Query: 228 R*RTPNAEL 254
R P +L
Sbjct: 193 SPRVPFKDL 201
>12_01_0778 +
7111562-7112152,7113034-7113157,7113252-7113395,
7113485-7113630,7113716-7113838,7113922-7114089,
7114253-7114474,7114572-7114745
Length = 563
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 285 EMMKVYALGEIVLRSEFFIDRSIREVLGMRRL 190
EM++ Y +GE + R EF + R R+ + RL
Sbjct: 79 EMLRRYEIGEELGRGEFGVTRRCRDAVTGERL 110
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 GAHHPTLVATSMNVPRP-AQSRAAACPTLPGSTGR*RTPN 245
GA T++ PRP A++R A + PG+T RTP+
Sbjct: 129 GAKRQAAAGTTVT-PRPRARTRGAPASSFPGATTPQRTPD 167
>09_02_0082 - 4060018-4061604
Length = 528
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 108 APIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLPGST 224
AP PP+ H PT A + VP P + A PG T
Sbjct: 174 APTPPVLATHVPTPPAPAPPVPTPL-APAPPADVPPGFT 211
>08_02_0329 - 15833124-15833825
Length = 233
Score = 25.8 bits (54), Expect = 9.8
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +3
Query: 60 TAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLPGSTGR*RT 239
+A T PW+ PSS A PPL A A + +P A P P + R +
Sbjct: 160 SADTAPWLQPSS----ATAPPLAPAGSGGQAAAAPPLPPLPVLAAGPPPPTPPARRRRAS 215
Query: 240 PNA 248
P A
Sbjct: 216 PPA 218
>08_01_0310 + 2714773-2715309,2716426-2716650
Length = 253
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 115 SHPLQGPTTLHWWLH 159
SH LQGPT+ WW H
Sbjct: 102 SHQLQGPTS-EWWDH 115
>08_01_0007 -
57681-57728,58260-58336,58418-58464,58808-58908,
59016-59108,59418-59540,59637-59755,60154-60510,
60888-61011
Length = 362
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 25 FSFDYFLLTLQVQRVPSPGYLRLPSTGAHQSHP 123
+ + L + Q VP P PS+GA HP
Sbjct: 16 YHYQALLAAVHQQTVPFPNPFPAPSSGAEPPHP 48
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 108 APIPPLTGA--HHPTLVATSMNVPRPAQSRAAACPTLPGS 221
AP+PP + P +A + N P PAQ+ A PG+
Sbjct: 69 APLPPTPASPGDSPPSIAPAGNPPTPAQAGAPPPSIAPGT 108
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 25.8 bits (54), Expect = 9.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 57 STAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLPGST 224
ST G + W + S E R P +T HP + PA +A PT+ GST
Sbjct: 1280 STEG-VGWTAGSDEWRYDPSGAMTPYRHPHTQVMMPHEDTPAILESAELPTV-GST 1333
>05_07_0176 - 28168595-28169806
Length = 403
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 166 MCPGRPNLEPPHAQHFPDRPVD 231
+C G + HA H P +PVD
Sbjct: 75 LCSGGHGISVVHAAHLPQQPVD 96
>05_01_0368 + 2892476-2893465
Length = 329
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 54 ASTAGTLPWVSPSSEHRCAPIPPLTGAHHPTLVA 155
A A + PWV + + R AP+ P A P VA
Sbjct: 74 APPAASSPWVLLTGKERKAPLLPTPTATSPAAVA 107
>04_04_0247 + 23888251-23888551,23889804-23890186
Length = 227
Score = 25.8 bits (54), Expect = 9.8
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 54 ASTAGTLPWVSPSSEHRCAPIPPL-TGAHHPTLVATSMNVPRPAQSRAAACPTLPGSTGR 230
AS A L V+ S R A TGA P+ AT+ R A+ AAA G T R
Sbjct: 6 ASRAARLAAVAASRAARLAAASASRTGAGDPSARATATAASRAARLAAAAASHAGGPTAR 65
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = +3
Query: 63 AGTLPWVSPSSEHRCAPIPPLTGAHHPTLVATSMNVPRPAQSRAAACPTLPG 218
A P PS + P+PP P + P P + AA PG
Sbjct: 630 ANAAPVPPPSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPG 681
>02_04_0270 - 21439788-21441680
Length = 630
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 108 APIPPLTGAHHPTLVATSMNVPRPAQSRAAA 200
A PPL+ H +L + + VP P ++R A
Sbjct: 9 AVAPPLSSFHSLSLSSRGLRVPSPCEARPRA 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,033,111
Number of Sequences: 37544
Number of extensions: 271670
Number of successful extensions: 1047
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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