Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14o06
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101029-1|AAI01030.1|  611|Homo sapiens MMEL1 protein protein.        30   8.3  
BC101027-1|AAI01028.2|  770|Homo sapiens membrane metallo-endope...    30   8.3  
AM040574-1|CAJ13481.1|  106|Homo sapiens immunoglobulin kappa ch...    30   8.3  
AL831784-1|CAI17336.1|  779|Homo sapiens mel transforming oncoge...    30   8.3  
AL589746-1|CAI22652.1|  779|Homo sapiens mel transforming oncoge...    30   8.3  
AF336981-1|AAL08942.1|  770|Homo sapiens neprilysin-like metallo...    30   8.3  

>BC101029-1|AAI01030.1|  611|Homo sapiens MMEL1 protein protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 444 YPDFVVPYMGRLLNKSYTNFQTFNVLYPKDS--TLQERREKVLRKLME 307
           +PD+++  M R L++ Y+N      LY ++S   L+   ++ LRKL E
Sbjct: 510 HPDYILEEMNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLRE 557


>BC101027-1|AAI01028.2|  770|Homo sapiens membrane
           metallo-endopeptidase-like 1 protein.
          Length = 770

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 444 YPDFVVPYMGRLLNKSYTNFQTFNVLYPKDS--TLQERREKVLRKLME 307
           +PD+++  M R L++ Y+N      LY ++S   L+   ++ LRKL E
Sbjct: 501 HPDYILEEMNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLRE 548


>AM040574-1|CAJ13481.1|  106|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 106

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 418 GKIIEQELHEFSNIQCFIPERFDAAGT*GESPKKINGTKFQTSFVRIYVQRFS 260
           GK+ E  ++E SN++  +P RF  +G+  E    IN  +    F   Y Q+++
Sbjct: 41  GKVPELLIYEASNLENGVPSRFSGSGSGTEFNLTINSLQ-PDDFATYYCQQYN 92


>AL831784-1|CAI17336.1|  779|Homo sapiens mel transforming
           oncogene-like 1 protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 444 YPDFVVPYMGRLLNKSYTNFQTFNVLYPKDS--TLQERREKVLRKLME 307
           +PD+++  M R L++ Y+N      LY ++S   L+   ++ LRKL E
Sbjct: 510 HPDYILEEMNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLRE 557


>AL589746-1|CAI22652.1|  779|Homo sapiens mel transforming
           oncogene-like 1 protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 444 YPDFVVPYMGRLLNKSYTNFQTFNVLYPKDS--TLQERREKVLRKLME 307
           +PD+++  M R L++ Y+N      LY ++S   L+   ++ LRKL E
Sbjct: 510 HPDYILEEMNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLRE 557


>AF336981-1|AAL08942.1|  770|Homo sapiens neprilysin-like
           metallopeptidase 2 protein.
          Length = 770

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -1

Query: 444 YPDFVVPYMGRLLNKSYTNFQTFNVLYPKDS--TLQERREKVLRKLME 307
           +PD+++  M R L++ Y+N      LY ++S   L+   ++ LRKL E
Sbjct: 501 HPDYILEEMNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLRE 548


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,984,913
Number of Sequences: 237096
Number of extensions: 1557235
Number of successful extensions: 7607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7607
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)