Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14o04
(294 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro... 31 0.19
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro... 31 0.19
AY119616-1|AAM50270.1| 809|Drosophila melanogaster LD43174p pro... 31 0.19
AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine nucl... 31 0.19
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,... 31 0.19
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,... 31 0.19
AE014297-2400|AAN13751.2| 809|Drosophila melanogaster CG7660-PB... 31 0.19
AE014297-2399|AAF55458.2| 831|Drosophila melanogaster CG7660-PA... 31 0.19
AY094969-1|AAM11322.1| 1226|Drosophila melanogaster SD08167p pro... 29 1.0
AE014298-2508|AAF48686.2| 1226|Drosophila melanogaster CG4937-PA... 29 1.0
AE014298-2507|ABI30987.1| 1510|Drosophila melanogaster CG4937-PB... 29 1.0
AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-P... 27 3.1
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P... 27 3.1
AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p pro... 27 4.0
AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA... 27 4.0
AF238306-1|AAF78217.1| 879|Drosophila melanogaster peroxinectin... 27 5.4
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 26 7.1
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 26 7.1
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 26 7.1
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 26 7.1
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 26 7.1
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 26 7.1
>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p
protein.
Length = 1416
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 291 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 151
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 498 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 544
>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
protein.
Length = 1506
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 291 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 151
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>AY119616-1|AAM50270.1| 809|Drosophila melanogaster LD43174p
protein.
Length = 809
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NGSRLQTIPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNAKR 209
N RL +PSPD +LSY + V H + P+ S D ASR L A R
Sbjct: 377 NFVRLSLVPSPDCQLSYGKQLTKVTHFVDASPVYGSS------DEASRSLRAFR 424
>AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine
nucleotide exchange factorDC3G protein.
Length = 1383
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 291 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 151
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 464 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 510
>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
isoform A protein.
Length = 1571
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 291 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 151
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
isoform B protein.
Length = 1520
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 291 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 151
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>AE014297-2400|AAN13751.2| 809|Drosophila melanogaster CG7660-PB,
isoform B protein.
Length = 809
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NGSRLQTIPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNAKR 209
N RL +PSPD +LSY + V H + P+ S D ASR L A R
Sbjct: 377 NFVRLSLVPSPDCQLSYGKQLTKVTHFVDASPVYGSS------DEASRSLRAFR 424
>AE014297-2399|AAF55458.2| 831|Drosophila melanogaster CG7660-PA,
isoform A protein.
Length = 831
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 48 NGSRLQTIPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNAKR 209
N RL +PSPD +LSY + V H + P+ S D ASR L A R
Sbjct: 377 NFVRLSLVPSPDCQLSYGKQLTKVTHFVDASPVYGSS------DEASRSLRAFR 424
>AY094969-1|AAM11322.1| 1226|Drosophila melanogaster SD08167p
protein.
Length = 1226
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 32 TTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 139
T P E ++ +S P +R PDLR DA+++K+
Sbjct: 8 TMPSTEVFNTIQFSSPLNRNGGLPDLRENDAKLQKE 43
>AE014298-2508|AAF48686.2| 1226|Drosophila melanogaster CG4937-PA,
isoform A protein.
Length = 1226
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 32 TTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 139
T P E ++ +S P +R PDLR DA+++K+
Sbjct: 8 TMPSTEVFNTIQFSSPLNRNGGLPDLRENDAKLQKE 43
>AE014298-2507|ABI30987.1| 1510|Drosophila melanogaster CG4937-PB,
isoform B protein.
Length = 1510
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 32 TTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 139
T P E ++ +S P +R PDLR DA+++K+
Sbjct: 292 TMPSTEVFNTIQFSSPLNRNGGLPDLRENDAKLQKE 327
>AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-PB,
isoform B protein.
Length = 1387
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 161 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARL 292
+PNG R++ +C +L + CL RG++V++ LP SARL
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLL---QRGASVTL-LPWSARL 227
>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
isoform A protein.
Length = 2224
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 161 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARL 292
+PNG R++ +C +L + CL RG++V++ LP SARL
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLL---QRGASVTL-LPWSARL 227
>AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p protein.
Length = 958
Score = 27.1 bits (57), Expect = 4.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -1
Query: 252 PRESGGSKQCDF---TSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRC 82
P G SK+ D+ TSR S S + R RSP S + +R+SR S R
Sbjct: 870 PFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTE--RSSRSSRYETPASGSSRS 927
Query: 81 RGS 73
R S
Sbjct: 928 RSS 930
>AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA
protein.
Length = 957
Score = 27.1 bits (57), Expect = 4.0
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -1
Query: 252 PRESGGSKQCDF---TSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRC 82
P G SK+ D+ TSR S S + R RSP S + +R+SR S R
Sbjct: 869 PFSGGESKRRDYSPETSRSSKSSKRNRSRSPSSSPKRYTE--RSSRSSRYETPASGSSRS 926
Query: 81 RGS 73
R S
Sbjct: 927 RSS 929
>AF238306-1|AAF78217.1| 879|Drosophila melanogaster
peroxinectin-related precursor protein.
Length = 879
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 72 PSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNAKR 209
PSPD +LSY + V H + P+ S D ASR L A R
Sbjct: 388 PSPDCQLSYGKQLTKVTHFVDASPVYGSS------DEASRSLRAFR 427
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1441 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1472
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1438 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1469
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1438 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1469
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1438 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1469
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1438 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1469
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 273 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 172
+D + + R GG CD+ R H+K RRR+
Sbjct: 1438 RDAMGKKKRRVGGDLHCDYLQR--HNKTANRRRT 1469
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,255,412
Number of Sequences: 53049
Number of extensions: 262568
Number of successful extensions: 792
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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