Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14n19
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein.     32   2.2  
BC146794-1|AAI46795.1| 1919|Homo sapiens discs, large homolog 5 ...    30   9.0  
AL450306-3|CAI17324.2| 1919|Homo sapiens discs, large homolog 5 ...    30   9.0  
AL391421-2|CAI12104.2| 1919|Homo sapiens discs, large homolog 5 ...    30   9.0  
AF352034-1|AAL83938.1| 1809|Homo sapiens DLG5 protein.                 30   9.0  
AF352033-1|AAL83937.1| 1809|Homo sapiens DLG5 protein.                 30   9.0  
AB091676-1|BAC65420.1| 1764|Homo sapiens discs large protein lp-...    30   9.0  
AB011155-1|BAA25509.2| 1952|Homo sapiens KIAA0583 protein protein.     30   9.0  

>AB020671-1|BAA74887.2| 1402|Homo sapiens KIAA0864 protein protein.
          Length = 1402

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/55 (25%), Positives = 31/55 (56%)
 Frame = -1

Query: 203 FKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNSLRNAQ*KFLYVVKAFKHW 39
           F+ K+++  +  +  RE+L ++  ++  D Q AR  SL + +   +  ++A +HW
Sbjct: 445 FQVKNSQALMCLENCREQLRSLPRASQEDEQDARAASLASVESALVSAIQALQHW 499


>BC146794-1|AAI46795.1| 1919|Homo sapiens discs, large homolog 5
           (Drosophila) protein.
          Length = 1919

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 510 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 560


>AL450306-3|CAI17324.2| 1919|Homo sapiens discs, large homolog 5
           (Drosophila) protein.
          Length = 1919

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 510 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 560


>AL391421-2|CAI12104.2| 1919|Homo sapiens discs, large homolog 5
           (Drosophila) protein.
          Length = 1919

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 510 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 560


>AF352034-1|AAL83938.1| 1809|Homo sapiens DLG5 protein.
          Length = 1809

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 400 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 450


>AF352033-1|AAL83937.1| 1809|Homo sapiens DLG5 protein.
          Length = 1809

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 400 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 450


>AB091676-1|BAC65420.1| 1764|Homo sapiens discs large protein lp-dlg
           protein.
          Length = 1764

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 355 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 405


>AB011155-1|BAA25509.2| 1952|Homo sapiens KIAA0583 protein protein.
          Length = 1952

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 587 KLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMAD 429
           K  +  AD+A+  R       + IVA RD  + R  C+N RRE  +  + +A+
Sbjct: 543 KEALQEADVAKCRRDWAFQERDKIVAERD--SIRTLCDNLRRERDRAVSELAE 593


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,306,282
Number of Sequences: 237096
Number of extensions: 1895913
Number of successful extensions: 8535
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8535
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)