Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14n10
(202 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063598-1|AAH63598.1| 323|Homo sapiens degenerative spermatocy... 28 6.4
AY541700-1|AAS68362.1| 323|Homo sapiens sphingolipid C4-hydroxy... 28 6.4
M35672-1|AAA51981.1| 291|Homo sapiens F9 protein. 27 8.4
M11309-1|AAA52023.1| 461|Homo sapiens F9 protein. 27 8.4
K02402-1|AAB59620.1| 461|Homo sapiens factor IX protein. 27 8.4
K02053-1|AAA56822.1| 461|Homo sapiens protein ( Human factor IX... 27 8.4
J00137-1|AAA52763.1| 461|Homo sapiens F9 protein. 27 8.4
J00136-1|AAA98726.1| 462|Homo sapiens factor IX protein. 27 8.4
BC109215-1|AAI09216.1| 461|Homo sapiens F9 protein protein. 27 8.4
BC109214-1|AAI09215.1| 461|Homo sapiens F9 protein protein. 27 8.4
AL033403-1|CAI42103.1| 461|Homo sapiens coagulation factor IX (... 27 8.4
AF536327-1|AAM96188.1| 461|Homo sapiens coagulation factor IX (... 27 8.4
>BC063598-1|AAH63598.1| 323|Homo sapiens degenerative spermatocyte
homolog 2, lipid desaturase (Drosophila) protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 130 WRWLLFXATYFGRC 171
WRWLLF A FG C
Sbjct: 66 WRWLLFWAYAFGGC 79
>AY541700-1|AAS68362.1| 323|Homo sapiens sphingolipid
C4-hydroxylase/delta 4-desaturase protein DES2 protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 130 WRWLLFXATYFGRC 171
WRWLLF A FG C
Sbjct: 66 WRWLLFWAYAFGGC 79
>M35672-1|AAA51981.1| 291|Homo sapiens F9 protein.
Length = 291
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 82 CWCPFGFEGKNCELDVTCNIK 102
>M11309-1|AAA52023.1| 461|Homo sapiens F9 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>K02402-1|AAB59620.1| 461|Homo sapiens factor IX protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>K02053-1|AAA56822.1| 461|Homo sapiens protein ( Human factor IX
gene, exons 7 and 8. ).
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>J00137-1|AAA52763.1| 461|Homo sapiens F9 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>J00136-1|AAA98726.1| 462|Homo sapiens factor IX protein.
Length = 462
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>BC109215-1|AAI09216.1| 461|Homo sapiens F9 protein protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>BC109214-1|AAI09215.1| 461|Homo sapiens F9 protein protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>AL033403-1|CAI42103.1| 461|Homo sapiens coagulation factor IX
(plasma thromboplastic component, Christmas disease,
hemo protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
>AF536327-1|AAM96188.1| 461|Homo sapiens coagulation factor IX
(plasma thromboplastic component, Christmas disease,
hemo protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 4 CWCKF*TDGKNAETPM-CNLQ 63
CWC F +GKN E + CN++
Sbjct: 117 CWCPFGFEGKNCELDVTCNIK 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,981,006
Number of Sequences: 237096
Number of extensions: 351736
Number of successful extensions: 547
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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