Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14n02
         (212 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif dom...    30   1.2  
BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif dom...    30   1.2  
BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif dom...    30   1.2  
AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.                 30   1.2  
AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.     30   1.2  
BC067743-1|AAH67743.1|  567|Homo sapiens C3orf17 protein protein.      27   8.3  
AK024325-1|BAB14885.1|  567|Homo sapiens protein ( Homo sapiens ...    27   8.3  

>BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif domain
            containing 9 protein.
          Length = 1589

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 194  DRSARVYKNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNK 36
            ++SAR+  +++V+  +     RAFE K K I  +  N +       +K N+NK
Sbjct: 842  EKSARIPDSIAVIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKTNFNK 894


>BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif domain
            containing 9 protein.
          Length = 1589

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 194  DRSARVYKNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNK 36
            ++SAR+  +++V+  +     RAFE K K I  +  N +       +K N+NK
Sbjct: 842  EKSARIPDSIAVIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKTNFNK 894


>BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif domain
            containing 9 protein.
          Length = 1589

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 194  DRSARVYKNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNK 36
            ++SAR+  +++V+  +     RAFE K K I  +  N +       +K N+NK
Sbjct: 842  EKSARIPDSIAVIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKTNFNK 894


>AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.
          Length = 1589

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 194  DRSARVYKNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNK 36
            ++SAR+  +++V+  +     RAFE K K I  +  N +       +K N+NK
Sbjct: 842  EKSARIPDSIAVIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKTNFNK 894


>AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.
          Length = 1595

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 194  DRSARVYKNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNK 36
            ++SAR+  +++V+  +     RAFE K K I  +  N +       +K N+NK
Sbjct: 848  EKSARIPDSIAVIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKTNFNK 900


>BC067743-1|AAH67743.1|  567|Homo sapiens C3orf17 protein protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 206 VTERDRSARVYKNMS--VLDAVEWIANRAFECKDKFIINKLTNADALQHLK 60
           + +R R A  +  +S  +  AV W  ++  + +  F+ NKL  ++ L+HL+
Sbjct: 357 IVQRFREAESFTQLSEEIQMAVVWCRSKKLKAQAIFLGNKLLKSNRLKHLE 407


>AK024325-1|BAB14885.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14263 fis, clone PLACE1001761. ).
          Length = 567

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 206 VTERDRSARVYKNMS--VLDAVEWIANRAFECKDKFIINKLTNADALQHLK 60
           + +R R A  +  +S  +  AV W  ++  + +  F+ NKL  ++ L+HL+
Sbjct: 357 IVQRFREAESFTQLSEEIQMAVVWCRSKKLKAQAIFLGNKLLKSNRLKHLE 407


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,329,906
Number of Sequences: 237096
Number of extensions: 326994
Number of successful extensions: 815
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)