Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14l20
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 311 6e-86
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 308 6e-85
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 122 4e-29
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 62 9e-11
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 40 3e-04
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 39 5e-04
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 32 0.080
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.14
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.18
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.24
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.24
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 30 0.32
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.43
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 29 0.56
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.74
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 28 0.98
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 0.98
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 28 0.98
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.0
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 3.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 4.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.0
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 6.9
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 6.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 9.1
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 9.1
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 9.1
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 311 bits (763), Expect = 6e-86
Identities = 136/172 (79%), Positives = 155/172 (90%)
Frame = -1
Query: 583 PLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD 404
PLVTY+P++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+D
Sbjct: 272 PLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRD 331
Query: 403 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 224
V AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEA
Sbjct: 332 VQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEA 391
Query: 223 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 68
W+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 392 WSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 42.7 bits (96), Expect = 4e-05
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 635 DLTEFQTNLVPYPRIHFP 582
DL EFQTNLVPYPRIHFP
Sbjct: 255 DLNEFQTNLVPYPRIHFP 272
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 308 bits (755), Expect = 6e-85
Identities = 136/172 (79%), Positives = 153/172 (88%)
Frame = -1
Query: 583 PLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD 404
PLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+D
Sbjct: 268 PLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRD 327
Query: 403 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 224
V AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEA
Sbjct: 328 VQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEA 387
Query: 223 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 68
W+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 388 WSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 42.7 bits (96), Expect = 4e-05
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 635 DLTEFQTNLVPYPRIHFP 582
DL EFQTNLVPYPRIHFP
Sbjct: 251 DLAEFQTNLVPYPRIHFP 268
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 122 bits (294), Expect = 4e-29
Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
Frame = -1
Query: 580 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 401
+V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V
Sbjct: 267 MVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEV 326
Query: 400 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 221
+ I +++TK + FV+W P + PP DL + + + N+T+I E +
Sbjct: 327 DEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIF 378
Query: 220 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 71
RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 379 RRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 27.9 bits (59), Expect = 1.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 635 DLTEFQTNLVPYPRIHF 585
DL + N+VP+PR+HF
Sbjct: 249 DLRKLAVNMVPFPRLHF 265
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 61.7 bits (143), Expect = 9e-11
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Frame = -1
Query: 628 PSSRLTWCLTPVSTSPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP-RHGK 452
PS R + LT S +P + KA + +V ++ P NQMV +P +
Sbjct: 262 PSPRCHFLLT--SYTPFTNQQ--VEEAKAIRKT-TVLDVMRRLLLPKNQMVSVNPSKKSC 316
Query: 451 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 272
+++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ +
Sbjct: 317 FISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL 376
Query: 271 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAAL 101
ML+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L
Sbjct: 377 -----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADL 431
Query: 100 EKDYE 86
+YE
Sbjct: 432 INEYE 436
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 39.9 bits (89), Expect = 3e-04
Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 16/201 (7%)
Frame = -2
Query: 591 PLPHWSRTRQSSLPRRPTM------NSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVC- 433
PLPH + S + + PT N P P H+ PP N +PV L
Sbjct: 104 PLPHDVASHPSYMVQSPTSYHACSNNQSPFP----HSHHPPLH--NPLPVSCQPVLRPPP 157
Query: 432 CTVVTS--YPRM*TRPSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPR 274
V S YP P+LP SKP V+ N V P +R + P+ ++P
Sbjct: 158 VPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPP 216
Query: 273 FNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPS 100
P+ CP+ PP L A+ SS S ++ + T + + P + WLP
Sbjct: 217 PLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPM 276
Query: 99 KRITKKSAWTPLKARVREPKS 37
+ T + P A V +P S
Sbjct: 277 TQPT----FQPPSANVYQPAS 293
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 39.1 bits (87), Expect = 5e-04
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Frame = -2
Query: 570 TRQSSLPRRPTM------NSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYP 409
T +S+P PT NS PLP + T ++ +IP ++ V TV +
Sbjct: 256 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS-----TSIPPTGNSTTPVTPTVPPTST 310
Query: 408 RM*TRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWCPEATWPRFNVP---SACCPTP 241
+ P P+ S SS+ + S S +T TS PP T VP ++ TP
Sbjct: 311 SSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTP 370
Query: 240 PPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLP 103
PP T+SS + S SCT TS + +S PV +P
Sbjct: 371 PPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTTPVTPTVP 414
Score = 30.7 bits (66), Expect = 0.18
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 15/141 (10%)
Frame = -2
Query: 534 NSFPLPRSQTHASS----PPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLP---SK 376
+S PLP + T ++ PPT +++ + + T TS P T S S
Sbjct: 104 SSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSN 163
Query: 375 P----SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKL----G 220
P S +ST + P S S ++ P P T P + S P PP S
Sbjct: 164 PLPTTSTSCTTSTSIPPTGGSSSLST--PITP--TVPPTSTSSTSIPIPPTSTSSTDTNS 219
Query: 219 LALTTSSTSCTPSVLSCTGTS 157
L T+STSCT S TG S
Sbjct: 220 SPLPTTSTSCTTSTSIPTGGS 240
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.9 bits (69), Expect = 0.080
Identities = 36/139 (25%), Positives = 56/139 (40%)
Frame = -2
Query: 543 PTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 364
PT S P PR T S+ R PV+ + A + + P+ SKP+ +
Sbjct: 964 PTSKSKPFPRLATGGSTAAAR--GPRPVVQNKPAAT---------KPVSMPAAKSKPAPM 1012
Query: 363 SNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTP 184
+N PVS + T + PP A R N A P + + A T S++ P
Sbjct: 1013 AN------PVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064
Query: 183 SVLSCTGTSVRVWRRESSP 127
S ++ +S + S+P
Sbjct: 1065 STVTSAASSPSNISKPSAP 1083
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.14
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 372 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 193
S+L +S+ P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 192 CTP--SVLSCTGTS 157
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
Score = 28.3 bits (60), Expect = 0.98
Identities = 36/139 (25%), Positives = 53/139 (38%)
Frame = -2
Query: 570 TRQSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRP 391
T S+ N+ L S T +S+P + + AS+ T+ T
Sbjct: 265 TSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPL 324
Query: 390 SLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLAL 211
S S + + +ST P+S STT+ T ++ TP S+ A
Sbjct: 325 SSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSAT 384
Query: 210 TTSSTSCTPSVLSCTGTSV 154
+ SST T S S T TSV
Sbjct: 385 SASSTPLT-SANSTTSTSV 402
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.18
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 426 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 292
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 27.1 bits (57), Expect = 2.3
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = -2
Query: 555 LPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMA---STWLAVCCTVVTSYPRM*TRPSL 385
+P P++ P+ S P R A+PV+ S VV P + RP++
Sbjct: 598 VPEAPSVPQPPVAPVAPEVPSVPQR--PAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAV 655
Query: 384 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 292
P P S PV V + PP P
Sbjct: 656 PVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 25.4 bits (53), Expect = 6.9
Identities = 23/90 (25%), Positives = 32/90 (35%)
Frame = -2
Query: 558 SLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPS 379
S+P+RP + P S P +P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 378 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 289
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.24
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 372 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 196
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 195 SCTPSVLS 172
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.24
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 372 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 196
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 195 SCTPSVLS 172
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 29.9 bits (64), Expect = 0.32
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -2
Query: 264 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 91
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 90 TKKSAWTPLKARVREPKST 34
S+ TP+ V EP+ T
Sbjct: 194 LGTSSKTPVYVVVDEPRFT 212
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.43
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 384 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 220
P+ P + S P + S TS PP + P + P + P+ PPSL +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
Score = 28.7 bits (61), Expect = 0.74
Identities = 39/142 (27%), Positives = 52/142 (36%), Gaps = 1/142 (0%)
Frame = -2
Query: 606 ALPPYPLPHWSRTRQSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCT 427
+LPP P P S S+P P S P P A S + P S+ AV
Sbjct: 335 SLPPPPPPPRSNAA-GSIPLPPQGRSAPPPPPPRSAPSTGRQ-----PPPLSSSRAVSNP 388
Query: 426 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTT-SHPPWCPEATWPRFNVPSACC 250
P + R S P+ P + + S T PV S S PP P + P + +
Sbjct: 389 PAPP-PAIPGR-SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 249 PTPPPSLKLGLALTTSSTSCTP 184
P PPS + L + P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPP 468
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 321 STTSHPPWCPE--ATWPRFNVPSACCPTPPP 235
++TS PP P ++ P VPS P PPP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 29.1 bits (62), Expect = 0.56
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Frame = -2
Query: 597 PYPLPHWSRTRQSSLPRRPTMNSFPLPRSQTHA-SSPPTRW*NAI--PVMASTWLAVCCT 427
PY +P+ RT S R T+ S P S+ HA +S T + I ++++ L
Sbjct: 345 PYLVPNSGRTLNSENARESTIRSVNSPFSEDHADASLTTHVFDPISPTALSNSVLNYDSN 404
Query: 426 VVTSYPRM*TRPSLPSK----PSVLSNS--STGVQ-PVSRSVSTTSHPPWCPEATWPRFN 268
+ P++ PS PSK PS+ +N T + S+S S S P E ++ N
Sbjct: 405 NFSGTPQINVVPSSPSKSQSGPSLPANPLLQTDISITYSQSASPVSGQPAMNENSYDLQN 464
Query: 267 VPSACCPTPPPS 232
+ C P P+
Sbjct: 465 A-NLCAPEMSPT 475
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.74
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 420 TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 250
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 249 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 118
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Score = 28.7 bits (61), Expect = 0.74
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Frame = -2
Query: 624 VPD*LGALPPYPLPHWSRTR---QSSLPRRPTMNSFP-LPRSQTHASS--PPTRW*NA-I 466
VP PP PLP S+ P P S P +P+S + A S PP ++ I
Sbjct: 1014 VPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI 1073
Query: 465 PVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEA 286
P + + A + P + +PS+ + P + S V PV P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPV-PKPSVAAPP--VPKPSVAVPPVPAPSGAPPVPK--PSV 1128
Query: 285 TWPRFNVPSACCPTPPPSL 229
P VPS P P PS+
Sbjct: 1129 AAPPVPVPSGAPPVPKPSV 1147
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -2
Query: 624 VPD*LGALPPYPLPHWSR----TRQSSLPRRPTMNSFPLPRSQTHASSPPTR 481
VP PP P P T +SS+P P N+ P P S + AS+ P R
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 0.98
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 609 GALPPYPLPHWSRTRQSSLPRRPTMNSFPLPRS 511
G LP P+P S R+ S+P P+ S P+ S
Sbjct: 643 GRLPKVPIPPLSNMRRGSVPIIPSSASLPMRTS 675
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 0.98
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 514 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 389
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 28.3 bits (60), Expect = 0.98
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 2/157 (1%)
Frame = -2
Query: 564 QSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSL 385
++ L R P+ + PL H S PP IP + +T ++ P + RPSL
Sbjct: 350 RAPLQRTPSGSLTPLSSRPAHTSLPP------IPTVQTT--------SSNVPPV-NRPSL 394
Query: 384 PSK-PSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTP-PPSLKLGLAL 211
SK PSV + S + P+S S + P++ P SA TP PSL+
Sbjct: 395 KSKSPSVSNILSNQLSPIS-SANNDVMARLQPKSPIPATKSYSATIQTPRSPSLR----- 448
Query: 210 TTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS 100
STS V TSV+ + +S V + PS
Sbjct: 449 RADSTSHIIKVPHLPDTSVKTAKTGASEIDVLSRYPS 485
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 177 LSCTGTSVRVWRRESSPKPVRTWLPSK 97
LS GTS + + SP PVRT L SK
Sbjct: 17 LSNNGTSNKAYSVPKSPAPVRTDLFSK 43
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 386 SDGRVHILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEACVCDLGNGK 529
S G +LGY ++ A++V+A + + HL+ G D K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 381 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 235
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 330 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 172
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 634 TSPSSRLTWCLTPVSTSPLVTYAPVISA 551
++PS+ T L P ++SP+ T AP +S+
Sbjct: 300 STPSTIATSTLQPTTSSPITTSAPSLSS 327
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 390 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 304
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 6.9
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -2
Query: 423 VTSYPRM*TRPSLP--SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 250
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 249 PTPPPSLKLGLALTTSSTSCTPSVLSCTGT 160
S LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 393 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 298
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 279 PRFNVPSACCPTPPPSLKLGLALTTSSTSCTP 184
P++ +P+A PT + GL L T+ +P
Sbjct: 126 PQYKIPAAPAPTSKRVVNRGLKLNTNLRQASP 157
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 411 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 301
PR LP K VL T + VSR TTS P
Sbjct: 293 PRPLLNSKLPRKTLVLDLDETLIHSVSRGSRTTSGQP 329
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.0 bits (52), Expect = 9.1
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -2
Query: 375 PSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSST 196
P++ QPV+ SV TS P PE PS+ PTP L + + SS+
Sbjct: 582 PTISQGLLAATQPVT-SVLNTSPLPKTPEKDRSLNVTPSSSTPTPASVLAPPSSASLSSS 640
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,920,751
Number of Sequences: 5004
Number of extensions: 67438
Number of successful extensions: 303
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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