Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14l20
(637 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 1.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.5
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 4.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 4.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 4.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 4.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.7
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP PL W + Q +PR R S P PR
Sbjct: 124 PVPVPIYCGNFPPRPLGPWI-SIQEQIPRFRHIGPSTPFPR 163
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP PL W + Q +PR R S P PR
Sbjct: 124 PVPVPIYCGNFPPRPLGPWI-SIQEQIPRFRHIGPSTPFPR 163
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP PL W + Q +PR R S P PR
Sbjct: 124 PVPVPIYCGNFPPRPLGPWI-SIQEQIPRFRHIGPSTPFPR 163
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 1.1
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP PL W + Q +PR R S P PR
Sbjct: 124 PVPVPIYCGNFPPRPLGPWI-SIQEQIPRFRHIGPSTPFPR 163
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 128 PVPVPVYYGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 167
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 128 PVPVPVYYGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 167
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 113 PVPVPVYYGNFPPRPMGSWI-SIQEQIPRFRHIGPSTPFPR 152
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 113 PVPVPVYYGNFPPRPMGSWI-SIQEQIPRFRHIGPSTPFPR 152
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 113 PVPVPVYYGNFPPRPMGSWI-SIQEQIPRFRHIGPSTPFPR 152
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 113 PVPVPVYYGNFPPRPMGSWI-SIQEQIPRFRHIGPSTPFPR 152
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 113 PVPVPVYYGNFPPRPMGSWI-SIQEQIPRFRHIGPSTPFPR 152
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 120 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 159
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 353 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 392
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 353 PIPVPVYCGNFPPRPMGPWI-SMQEQIPRFRYIGPSTPFPR 392
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 121 PVPVPVYCGNFPPRPMGPWI-SIQEQIPRFRHIGPSTPFPR 160
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 122 PVPVPIYCGNFPPRPMGPWI-SIQEQIPRFRHIGPSTPFPR 161
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 342 QPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLK 226
+PV S +TT+ P ++T R ++ S C T P K
Sbjct: 320 KPVLSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQK 358
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 336 PVPVPIYCGNFPPRPMGPWI-SIQEQIPRFRYIGPSTPFPR 375
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 633 PHRVPD*LGALPPYPLPHWSRTRQSSLPR-RPTMNSFPLPR 514
P VP G PP P+ W + Q +PR R S P PR
Sbjct: 347 PVPVPIYCGNFPPRPMGPWI-SIQEQIPRFRYIGPSTPFPR 386
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 43 RLPHPRLQRSP 75
R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 43 RLPHPRLQRSP 75
R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 294 PEATWPRFNVPSACCPTPPPSLKLGLA 214
P +PRF P+A PP + + GLA
Sbjct: 153 PPTPFPRFIPPNAYRFRPPLNPRFGLA 179
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 294 PEATWPRFNVPSACCPTPPPSLKLGLA 214
P +PRF P+A PP + + GLA
Sbjct: 163 PPTPFPRFIPPNAYRFRPPLNPRFGLA 189
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 253 LSNTTAIAEAWARLDHKFD 197
L+NT + W LD+ FD
Sbjct: 32 LTNTLNVIHKWKYLDYDFD 50
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 341 NRFQGRYQLPA 309
NRF G Y++PA
Sbjct: 435 NRFSGEYEIPA 445
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 380 QNQAYYPIRRLVSNRFQGRYQ 318
Q +A+Y +R +N FQ +YQ
Sbjct: 17 QAKAHYSLRDFKANIFQVKYQ 37
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 436 MLYRGDVVPKDVNAAIAT 383
M+Y G V D+NA IAT
Sbjct: 319 MMYLGTPVMPDLNALIAT 336
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 139 PPPYPHRRTSARKHAWRT 192
P P+P R T A+ H + T
Sbjct: 417 PKPFPRRATLAQLHNFTT 434
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,777
Number of Sequences: 438
Number of extensions: 5649
Number of successful extensions: 46
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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