Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14l04
(264 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025177-1|ABE98143.1| 1084|Drosophila melanogaster AT27333p pro... 27 3.6
AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA... 27 3.6
AE014297-108|AAF52121.2| 1081|Drosophila melanogaster CG14651-PA... 27 3.6
AE014296-3034|AAF49250.2| 169|Drosophila melanogaster CG13380-P... 27 3.6
AY052032-1|AAK93456.1| 402|Drosophila melanogaster LP01339p pro... 27 4.8
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein... 27 4.8
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 27 4.8
AE013599-1693|AAF58383.1| 402|Drosophila melanogaster CG10814-P... 27 4.8
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 26 6.3
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 26 6.3
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 26 6.3
Y09125-1|CAA70343.1| 751|Drosophila melanogaster DNA binding pr... 26 8.3
U88538-1|AAC47464.1| 751|Drosophila melanogaster pangolin protein. 26 8.3
AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p pro... 26 8.3
AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA... 26 8.3
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB... 26 8.3
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA... 26 8.3
AE014135-13|AAN06548.1| 751|Drosophila melanogaster CG17964-PG,... 26 8.3
AE014135-12|AAN06547.1| 751|Drosophila melanogaster CG17964-PF,... 26 8.3
AE014135-11|AAN06546.1| 751|Drosophila melanogaster CG17964-PE,... 26 8.3
AE014135-10|AAN06545.1| 751|Drosophila melanogaster CG17964-PD,... 26 8.3
AE014135-9|AAF59370.2| 751|Drosophila melanogaster CG17964-PC, ... 26 8.3
AE014135-8|AAN06544.2| 751|Drosophila melanogaster CG17964-PB, ... 26 8.3
AE014135-7|AAF59371.2| 751|Drosophila melanogaster CG17964-PA, ... 26 8.3
AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-P... 26 8.3
>BT025177-1|ABE98143.1| 1084|Drosophila melanogaster AT27333p
protein.
Length = 1084
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 161 LYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSEL 30
LY+ N + A QA PSSE+ R +++++ + EL
Sbjct: 643 LYERFIDFYLLNVNTYMQAYAQAHKPSSEVKRDILENKRLKEEL 686
>AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA
protein.
Length = 4081
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDNKTALLSASIQASL 87
P D V +N+ TVL DNK L+ S + L
Sbjct: 1779 PVDAVWIENLNTVLDDNKMLCLANSERIKL 1808
>AE014297-108|AAF52121.2| 1081|Drosophila melanogaster CG14651-PA
protein.
Length = 1081
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 161 LYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSEL 30
LY+ N + A QA PSSE+ R +++++ + EL
Sbjct: 640 LYERFIDFYLLNVNTYMQAYAQAHKPSSEVKRDILENKRLKEEL 683
>AE014296-3034|AAF49250.2| 169|Drosophila melanogaster CG13380-PB
protein.
Length = 169
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 114 SLCIYSSFSPFLRDLPPVGRFSPCFFRTP 28
S C ++ SPFL+D+ P R S F R P
Sbjct: 16 SKCYWNLSSPFLKDVIPKKRPSKAFNRKP 44
>AY052032-1|AAK93456.1| 402|Drosophila melanogaster LP01339p
protein.
Length = 402
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 197 SCYFSTPPFDTVLYDNIRTV 138
SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363
>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
protein.
Length = 2797
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDNKTALLS 108
P D V +N+ +VL DNKT L+
Sbjct: 739 PVDAVWIENLNSVLDDNKTLTLA 761
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDNKTALLS 108
P D++ +N+ +VL DNKT L+
Sbjct: 2336 PVDSIWIENLNSVLDDNKTLTLA 2358
>AE013599-1693|AAF58383.1| 402|Drosophila melanogaster CG10814-PA
protein.
Length = 402
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 197 SCYFSTPPFDTVLYDNIRTV 138
SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 223 APESTSSIPPATFQLLPSIPYCTTTSG 143
A +ST+ PPA P PY TT G
Sbjct: 2263 AVQSTTLPPPAQVNQYPGTPYSATTLG 2289
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 223 APESTSSIPPATFQLLPSIPYCTTTSG 143
A +ST+ PPA P PY TT G
Sbjct: 2263 AVQSTTLPPPAQVNQYPGTPYSATTLG 2289
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 223 APESTSSIPPATFQLLPSIPYCTTTSG 143
A +ST+ PPA P PY TT G
Sbjct: 2223 AVQSTTLPPPAQVNQYPGTPYSATTLG 2249
>Y09125-1|CAA70343.1| 751|Drosophila melanogaster DNA binding
protein protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>U88538-1|AAC47464.1| 751|Drosophila melanogaster pangolin protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p
protein.
Length = 406
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 8 RFYVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQ 121
++Y D + + + + N PT S+ + +KLE M R Q
Sbjct: 335 KYYFDLRTLAEANELNFPTEPLSKERAQKLEAMSRVMQ 372
>AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA,
isoform A protein.
Length = 4390
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDN-KTALLSASI 99
P D V +N+ TVL DN K L+S I
Sbjct: 2031 PVDAVWIENLNTVLDDNKKLCLMSGEI 2057
>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
isoform B protein.
Length = 3966
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDNKTALLSA 105
P D V +N+ TVL DNK L++
Sbjct: 1646 PVDAVWIENMNTVLDDNKKLCLTS 1669
>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
isoform A protein.
Length = 3868
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 176 PFDTVLYDNIRTVLKDNKTALLSA 105
P D V +N+ TVL DNK L++
Sbjct: 1646 PVDAVWIENMNTVLDDNKKLCLTS 1669
>AE014135-13|AAN06548.1| 751|Drosophila melanogaster CG17964-PG,
isoform G protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-12|AAN06547.1| 751|Drosophila melanogaster CG17964-PF,
isoform F protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-11|AAN06546.1| 751|Drosophila melanogaster CG17964-PE,
isoform E protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-10|AAN06545.1| 751|Drosophila melanogaster CG17964-PD,
isoform D protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-9|AAF59370.2| 751|Drosophila melanogaster CG17964-PC,
isoform C protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-8|AAN06544.2| 751|Drosophila melanogaster CG17964-PB,
isoform B protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014135-7|AAF59371.2| 751|Drosophila melanogaster CG17964-PA,
isoform A protein.
Length = 751
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 14 YVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQFCYP 133
YV K RKK +GG + +K + ++ Q+C P
Sbjct: 348 YVSKKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKP 387
>AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-PA
protein.
Length = 406
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 8 RFYVDSKGVRKKHGENLPTGGRSRRKGEKLE*MQREEQ 121
++Y D + + + + N PT S+ + +KLE M R Q
Sbjct: 335 KYYFDLRTLAEANELNFPTEPLSKERAQKLEAMSRVMQ 372
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,315,778
Number of Sequences: 53049
Number of extensions: 189834
Number of successful extensions: 513
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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