Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14k24
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein. 36 0.045
DQ177368-1|ABA60829.1| 531|Drosophila melanogaster Iris protein. 36 0.045
DQ177367-1|ABA60828.1| 528|Drosophila melanogaster Iris protein. 36 0.045
DQ177366-1|ABA60827.1| 531|Drosophila melanogaster Iris protein. 36 0.045
AY069209-1|AAL39354.1| 531|Drosophila melanogaster GH26159p pro... 36 0.045
AE014134-205|AAF51415.1| 531|Drosophila melanogaster CG4715-PA ... 36 0.045
DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177374-1|ABA60835.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177371-1|ABA60832.1| 531|Drosophila melanogaster Iris protein. 35 0.10
DQ177370-1|ABA60831.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein. 35 0.10
DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein. 33 0.32
BT010279-1|AAQ23597.1| 729|Drosophila melanogaster RE05370p pro... 32 0.74
AE014296-196|AAF47456.1| 729|Drosophila melanogaster CG9194-PA ... 32 0.74
BT001258-1|AAN71014.1| 397|Drosophila melanogaster AT02070p pro... 29 9.1
AY051454-1|AAK92878.1| 397|Drosophila melanogaster GH12043p pro... 29 9.1
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 29 9.1
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 29 9.1
>DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177368-1|ABA60829.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177367-1|ABA60828.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177366-1|ABA60827.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>AY069209-1|AAL39354.1| 531|Drosophila melanogaster GH26159p
protein.
Length = 531
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>AE014134-205|AAF51415.1| 531|Drosophila melanogaster CG4715-PA
protein.
Length = 531
Score = 36.3 bits (80), Expect = 0.045
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177375-1|ABA60836.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177374-1|ABA60835.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177371-1|ABA60832.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177370-1|ABA60831.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P L+ + Y GI D + Y P+
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGEIQLVDTETPYLGINDHMDRYFPLQS- 300
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G F+C
Sbjct: 301 -LDDCIKL-GEERFIC 314
>DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.32
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 445 NTVIMFITMPLLKSTTVPFNLYRAMTLPFCRGTMCLLIISGNEYFGITDSKNYYVPVSDN 266
N V IT+PLL + FN+YR +P + L+ + Y GI D + Y P+ +
Sbjct: 244 NHVEFQITVPLLDAEK--FNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPL--H 299
Query: 265 FRQDCQEFTGYNEFLC 218
DC + G +C
Sbjct: 300 SLDDCIKL-GEERLIC 314
>BT010279-1|AAQ23597.1| 729|Drosophila melanogaster RE05370p
protein.
Length = 729
Score = 32.3 bits (70), Expect = 0.74
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 722 HVFSQHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANGN 567
H +S D R + FG + + ++Q QH H R+RH G+
Sbjct: 258 HAYSDPDLRTMGRGYDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGD 309
>AE014296-196|AAF47456.1| 729|Drosophila melanogaster CG9194-PA
protein.
Length = 729
Score = 32.3 bits (70), Expect = 0.74
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 722 HVFSQHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANGN 567
H +S D R + FG + + ++Q QH H R+RH G+
Sbjct: 258 HAYSDPDLRTMGRGYDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGD 309
>BT001258-1|AAN71014.1| 397|Drosophila melanogaster AT02070p
protein.
Length = 397
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -1
Query: 710 QHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANG 570
QH + Q Q ++ Q+ + + + ++ QH QH ++H G
Sbjct: 279 QHQQHQQHQQHQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQG 325
>AY051454-1|AAK92878.1| 397|Drosophila melanogaster GH12043p
protein.
Length = 397
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -1
Query: 710 QHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANG 570
QH + Q Q ++ Q+ + + + ++ QH QH ++H G
Sbjct: 279 QHQQHQQHQQHQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQG 325
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -1
Query: 710 QHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANG 570
QH + Q Q ++ Q+ + + + ++ QH QH ++H G
Sbjct: 862 QHQQHQQHQQHQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQG 908
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -1
Query: 710 QHDERAQRQIRRRSSFGQNAEANSKTNAKEQTQHFQHGYRRRHAANG 570
QH + Q Q ++ Q+ + + + ++ QH QH ++H G
Sbjct: 862 QHQQHQQHQQHQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQG 908
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,765,368
Number of Sequences: 53049
Number of extensions: 688450
Number of successful extensions: 2116
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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