Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14k20
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 98 2e-20
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 97 3e-20
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 97 3e-20
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 97 3e-20
AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens ... 97 3e-20
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 97 3e-20
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 96 1e-19
AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding prot... 42 2e-09
BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein. 35 0.27
AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B... 35 0.27
AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A... 35 0.27
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 34 0.47
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 34 0.47
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.47
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.47
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 34 0.47
AF286472-1|AAG00551.1| 567|Homo sapiens retinitis pigmentosa GT... 34 0.47
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 34 0.47
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 33 0.62
BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein. 33 0.62
AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 33 0.62
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein. 33 0.82
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein. 33 0.82
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein. 33 0.82
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 33 1.1
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 33 1.1
U07000-4|AAB60391.1| 278|Homo sapiens unknown protein. 32 1.4
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 2.5
M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyt... 31 3.3
J00127-1|AAA52426.1| 644|Homo sapiens FGA protein. 31 3.3
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 4.4
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 4.4
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 4.4
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 31 4.4
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 4.4
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 4.4
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 4.4
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 31 4.4
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 4.4
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 30 5.8
BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein. 30 5.8
AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepi... 30 5.8
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 30 5.8
AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein. 30 5.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 7.6
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 7.6
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 30 7.6
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 98.3 bits (234), Expect = 2e-20
Identities = 76/208 (36%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 538
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M +A
Sbjct: 539 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMKNA--Q 596
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 597 KKMNRLGKKGEADRHVFDMKPKHLLSGK 624
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 97.5 bits (232), Expect = 3e-20
Identities = 76/208 (36%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 538
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M A
Sbjct: 539 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-Q 597
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 598 KKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 97.5 bits (232), Expect = 3e-20
Identities = 76/208 (36%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 422 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 481
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 482 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 536
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M A
Sbjct: 537 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-Q 595
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 596 KKMNRLGKKGEADRHVFDMKPKHLLSGK 623
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 97.5 bits (232), Expect = 3e-20
Identities = 76/208 (36%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 538
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M A
Sbjct: 539 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-Q 597
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 598 KKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AK001552-1|BAA91752.1| 634|Homo sapiens protein ( Homo sapiens cDNA
FLJ10690 fis, clone NT2RP3000350, weakly similar to
PROBABLE GTP-BINDING PROTEIN HP0303. ).
Length = 634
Score = 97.5 bits (232), Expect = 3e-20
Identities = 76/208 (36%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMHSLGVDMDDKDDAH 538
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M A
Sbjct: 539 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-Q 597
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 598 KKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 97.5 bits (232), Expect = 3e-20
Identities = 76/208 (36%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 538
Query: 260 F--------TXXXXXXXXXXXXXXXXXXXREPSNQP-----VADPIMRVKVKRMAHAAIA 120
+ + S P + D M K K M A
Sbjct: 539 YAVQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNA-Q 597
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 598 KKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 95.9 bits (228), Expect = 1e-19
Identities = 74/208 (35%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIREL 441
E++D IPE WE HNIA YIDP I A G Y + D+ + EIR+L
Sbjct: 424 EKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQL 483
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + ES+ K + P MPRT AK QR+ L K+M LGVDM + DAH
Sbjct: 484 AKQIREKKKLKILESK-EKNTQGPRMPRT--AKKVQRTV--LEKEMRSLGVDMDDKDDAH 538
Query: 260 FTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR----------VKVKRMAHAAI---A 120
+ PS+ + R VK+ + A +
Sbjct: 539 YA-VQARRSRSITRKRKREDSAPPSSVARSGSCSRTPRDVSGLRDVKMVKNAKTMMKNAQ 597
Query: 119 KKTKKMGLKGEADRFIGTKMPKHLFAGK 36
KK ++G KGEADR + PKHL +GK
Sbjct: 598 KKMNRLGKKGEADRHVFDMKPKHLLSGK 625
>AF065393-1|AAC24364.1| 562|Homo sapiens putative G-binding protein
protein.
Length = 562
Score = 41.9 bits (94), Expect(2) = 2e-09
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 620 ERYDVIPEXWEXHNIAXYIDPDI 552
E+YD IPE WE HN+A YIDP I
Sbjct: 463 EKYDKIPEIWEGHNVADYIDPAI 485
Score = 39.5 bits (88), Expect(2) = 2e-09
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -3
Query: 440 ARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDAH 261
A+QIR KK + +S+ K + P MPRT AK QR+ L +M LGVDM + +AH
Sbjct: 488 AKQIREKKKLKILQSK-EKNTQGPRMPRT--AKKVQRAD--LENEMRSLGVDMDDKDNAH 542
Query: 260 F 258
+
Sbjct: 543 Y 543
>BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.27
Identities = 25/88 (28%), Positives = 35/88 (39%)
Frame = -2
Query: 537 RVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAA 358
RVG+G G RR + G E + G + + P G S G A EA +
Sbjct: 80 RVGDGPQQEPGEDEERRERSPEGPREE--EAAGGEEESPDSSPHGEASRGAAEPEAQLSN 137
Query: 357 HLASQDQAEVHLQAQEGHGETRRGHVGD 274
HLA + AE +A +G G +
Sbjct: 138 HLAEEGPAEGSGEAARVNGRREDGEASE 165
>AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B
protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.27
Identities = 25/88 (28%), Positives = 35/88 (39%)
Frame = -2
Query: 537 RVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAA 358
RVG+G G RR + G E + G + + P G S G A EA +
Sbjct: 358 RVGDGPQQEPGEDEERRERSPEGPREE--EAAGGEEESPDSSPHGEASRGAAEPEAQLSN 415
Query: 357 HLASQDQAEVHLQAQEGHGETRRGHVGD 274
HLA + AE +A +G G +
Sbjct: 416 HLAEEGPAEGSGEAARVNGRREDGEASE 443
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/85 (25%), Positives = 31/85 (36%)
Frame = -2
Query: 528 EGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHLA 349
EG RG + + R RE + P + Q+E + V G A EAGD+
Sbjct: 109 EGASPGRG----AQGEPRGEAQREPEDSAAP-ERQEEAEQRPEVPEGSASGEAGDSVDAE 163
Query: 348 SQDQAEVHLQAQEGHGETRRGHVGD 274
+ + G G VGD
Sbjct: 164 GPLGDNIEAEGPAGDSVEAEGRVGD 188
>AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A
protein.
Length = 686
Score = 34.7 bits (76), Expect = 0.27
Identities = 25/88 (28%), Positives = 35/88 (39%)
Frame = -2
Query: 537 RVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAA 358
RVG+G G RR + G E + G + + P G S G A EA +
Sbjct: 358 RVGDGPQQEPGEDEERRERSPEGPREE--EAAGGEEESPDSSPHGEASRGAAEPEAQLSN 415
Query: 357 HLASQDQAEVHLQAQEGHGETRRGHVGD 274
HLA + AE +A +G G +
Sbjct: 416 HLAEEGPAEGSGEAARVNGRREDGEASE 443
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/85 (25%), Positives = 31/85 (36%)
Frame = -2
Query: 528 EGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHLA 349
EG RG + + R RE + P + Q+E + V G A EAGD+
Sbjct: 109 EGASPGRG----AQGEPRGEAQREPEDSAAP-ERQEEAEQRPEVPEGSASGEAGDSVDAE 163
Query: 348 SQDQAEVHLQAQEGHGETRRGHVGD 274
+ + G G VGD
Sbjct: 164 GPLGDNIEAEGPAGDSVEAEGRVGD 188
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P + S GP+G R E E GP G GP
Sbjct: 1291 GEPGPSGRSGPPGPKGERGEKGESGPSGAAGP 1322
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGP 851
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 1291 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322
>AF286472-1|AAG00551.1| 567|Homo sapiens retinitis pigmentosa
GTPase regulator protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.47
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAV-HEAGDAAH 355
GEG+G G + G EG++ G + ++EG +G GE E G+
Sbjct: 269 GEGKGEEEGEEGEGEEEGEEGEG-EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEG 327
Query: 354 LASQDQAEVHLQAQEGHGE 298
+ + + + +EG GE
Sbjct: 328 EEEEGEGKGEEEGEEGEGE 346
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 33.9 bits (74), Expect = 0.47
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 144 EDGPRGHRQEDQEDGPQGRGGP 79
E GP G R ED +GP+GRGGP
Sbjct: 784 EIGPPGPRGEDGPEGPKGRGGP 805
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 1245 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1276
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial
lining protein protein.
Length = 1836
Score = 33.5 bits (73), Expect = 0.62
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 513 ARGWRHVRRAQDR-AGRHREGDQGTGPADTQQEGHPQGRVS 394
+RGW +RR+ R A HR+ P T + HPQG+ S
Sbjct: 851 SRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPQGKYS 891
>BC146783-1|AAI46784.1| 1773|Homo sapiens FNDC1 protein protein.
Length = 1773
Score = 33.5 bits (73), Expect = 0.62
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 513 ARGWRHVRRAQDR-AGRHREGDQGTGPADTQQEGHPQGRVS 394
+RGW +RR+ R A HR+ P T + HPQG+ S
Sbjct: 788 SRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPQGKYS 828
>AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein.
Length = 1783
Score = 33.5 bits (73), Expect = 0.62
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 513 ARGWRHVRRAQDR-AGRHREGDQGTGPADTQQEGHPQGRVS 394
+RGW +RR+ R A HR+ P T + HPQG+ S
Sbjct: 798 SRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPQGKYS 838
>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHL 352
G G+ T G R R R+ H E G + Q H +G G+A + G++ +
Sbjct: 1784 GHGQSTQTGSRTTGR---RSSGHSEYSDSEGHSGFSQRPHSRGHTH-GQAGSQHGESESI 1839
Query: 351 ASQDQAEVHLQAQEGHGETRRGH 283
+ H Q + G ++ GH
Sbjct: 1840 VDERHGTTHGQTGDTSGHSQSGH 1862
>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
Length = 2391
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHL 352
G G+ T G R R R+ H E G + Q H +G G+A + G++ +
Sbjct: 1784 GHGQSTQTGSRTTGR---RSSGHSEYSDSEGHSGFSQRPHSRGHTH-GQAGSQHGESESI 1839
Query: 351 ASQDQAEVHLQAQEGHGETRRGH 283
+ H Q + G ++ GH
Sbjct: 1840 VDERHGTTHGQTGDTSGHSQSGH 1862
>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 33.1 bits (72), Expect = 0.82
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVHEAGDAAHL 352
G G+ T G R R R+ H E G + Q H +G G+A + G++ +
Sbjct: 1784 GHGQSTQTGSRTTGR---RSSGHSEYSDSEGHSGFSQRPHSRGHTH-GQAGSQHGESESI 1839
Query: 351 ASQDQAEVHLQAQEGHGETRRGH 283
+ H Q + G ++ GH
Sbjct: 1840 VDERHGTTHGQTGDTSGHSQSGH 1862
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = -2
Query: 540 GRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQ---GRVSPGEAVHEA 370
GR G G G + VR G G+G + + GH + G+ S G HE+
Sbjct: 766 GRQGSGSGHSPS--RVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQAS-GFGQHES 822
Query: 369 GDAAHLASQDQAEVHLQAQEGHGET 295
G + A H +Q HG T
Sbjct: 823 GSGQGYSQHGSASGHFSSQGRHGST 847
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Frame = -2
Query: 609 RHPGDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPAD 430
RH G + + G G +G G+ + HVR G G+G +
Sbjct: 272 RHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSY 331
Query: 429 TQQEGHPQ---GRVSPGEAVHE--AGDAAHLASQDQAEVHLQAQEGHGET 295
+ GH + G+ S G HE +G ++ + H +Q HG T
Sbjct: 332 SYSRGHYESGSGQTS-GFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGST 380
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = -2
Query: 540 GRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQ---GRVSPGEAVHEA 370
GR G G G + VR G G+G + + GH + G+ S G HE+
Sbjct: 766 GRQGSGSGHSPS--RVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQAS-GFGQHES 822
Query: 369 GDAAHLASQDQAEVHLQAQEGHGET 295
G + A H +Q HG T
Sbjct: 823 GSGQGYSQHGSASGHFSSQGRHGST 847
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Frame = -2
Query: 609 RHPGDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTGPAD 430
RH G + + G G +G G+ + HVR G G+G +
Sbjct: 272 RHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSY 331
Query: 429 TQQEGHPQ---GRVSPGEAVHE--AGDAAHLASQDQAEVHLQAQEGHGET 295
+ GH + G+ S G HE +G ++ + H +Q HG T
Sbjct: 332 SYSRGHYESGSGQTS-GFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGST 380
>U07000-4|AAB60391.1| 278|Homo sapiens unknown protein.
Length = 278
Score = 32.3 bits (70), Expect = 1.4
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -2
Query: 540 GRVGEGRGT---ARGWRHVRRAQDRAGRHREGDQGTGP-ADTQQEGHPQGRVSPGEAVHE 373
G G GRG ARG R R+ R R +G+ G+GP A+ P+ G +V E
Sbjct: 3 GSEGRGRGREKRARGARRKRKQGGREARAADGEGGSGPGAEAGARTRPREEAEGGGSVEE 62
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E GP+G R E E GP G GP
Sbjct: 44 GEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 75
>M99578-1|AAA36187.1| 550|Homo sapiens protein ( Human lymphocyte
surface protein exons 1-5, complete cds. ).
Length = 550
Score = 31.1 bits (67), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 183 PAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 76
P G P + + PRG R+ + + +GRGGP+
Sbjct: 486 PRGPAPGRCPQGEPGPPRGRRRSQKRERERGRGGPM 521
>J00127-1|AAA52426.1| 644|Homo sapiens FGA protein.
Length = 644
Score = 31.1 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -2
Query: 525 GRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQ----GRVSPGEAVHEAGDAA 358
G G W+ AG G GTG Q G P+ G +PG + E G A
Sbjct: 314 GTGGTATWKPGSSGPGSAGSWNSGSSGTGSTGNQNPGSPRPGSTGTWNPGSS--ERGSAG 371
Query: 357 HLASQ 343
H S+
Sbjct: 372 HWTSE 376
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1145 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1176
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 177 GGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 76
G H RE +E G +G + E DGP GR GP+
Sbjct: 1313 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1345
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1222 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1253
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1273 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1304
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 1261 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 1292
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 177 GGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPV 76
G H RE +E G +G + E DGP GR GP+
Sbjct: 1226 GPSGHMGREGRE-GEKGAKGEPGPDGPPGRTGPM 1258
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
G P E+ GP+G R E E GP G GP
Sbjct: 472 GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGP 503
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 30.3 bits (65), Expect = 5.8
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = -2
Query: 507 GWRHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQ 337
G RH R Q DRAG D +G TQ Q S +A AGD Q
Sbjct: 214 GSRHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGDRHGSHHQQS 273
Query: 336 AEVHLQAQEGHGE 298
A+ + GHG+
Sbjct: 274 ADSSRHSGIGHGQ 286
>BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein.
Length = 1797
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 455 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 279
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 278 ET 273
ET
Sbjct: 185 ET 186
>AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepine
receptor interacting protein protein.
Length = 1857
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 455 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 279
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 125 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 184
Query: 278 ET 273
ET
Sbjct: 185 ET 186
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 30.3 bits (65), Expect = 5.8
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = -2
Query: 507 GWRHVRRAQ-DRAGRHREGDQG--TGPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQ 337
G RH R Q DRAG D +G TQ Q S +A AGD Q
Sbjct: 442 GSRHPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGDRHGSHHQQS 501
Query: 336 AEVHLQAQEGHGE 298
A+ + GHG+
Sbjct: 502 ADSSRHSGIGHGQ 514
>AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein.
Length = 1810
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 455 EIRELARQIRNKKAILKDESRLVKQSTKP-VMPRTSRAKTKQRSTSKLRKDMEKLGVDMS 279
E+ ++R + AILK+E++++++S+ P + R K K + + K +E+ +
Sbjct: 138 ELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQ 197
Query: 278 ET 273
ET
Sbjct: 198 ET 199
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
GR E+ G RG R E E G QGR GP
Sbjct: 2014 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 2045
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
GR E+ G RG R E E G QGR GP
Sbjct: 2046 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 2077
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 174 GRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
GR E+ G RG R E E G QGR GP
Sbjct: 685 GRAGGVGEAGRPGERGERGEKGERGEQGRDGP 716
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,187,971
Number of Sequences: 237096
Number of extensions: 1484296
Number of successful extensions: 8617
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8532
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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