Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14k20
(625 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p pro... 148 7e-36
AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD2383... 148 7e-36
AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA ... 148 7e-36
BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p pro... 31 1.3
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA... 30 2.9
AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC... 29 3.9
AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB... 29 3.9
L31626-1|AAA21800.1| 416|Drosophila melanogaster homeodomain-co... 29 5.1
BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p pro... 29 5.1
AY051482-1|AAK92906.1| 497|Drosophila melanogaster GH14349p pro... 29 5.1
AE014296-2840|AAF49390.3| 497|Drosophila melanogaster CG9665-PA... 29 5.1
AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA... 29 5.1
AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p pro... 29 6.8
AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-P... 29 6.8
AE014297-1753|AAF54983.1| 776|Drosophila melanogaster CG14366-P... 29 6.8
AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA... 29 6.8
>BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p
protein.
Length = 461
Score = 148 bits (358), Expect = 7e-36
Identities = 88/219 (40%), Positives = 117/219 (53%), Gaps = 23/219 (10%)
Frame = -3
Query: 623 DERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRE 444
+ERYD+IPE W+ HNIA YID DIF G+Y P + +D+T++EIRE
Sbjct: 234 EERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGVYKVPDMTMDETLKEIRE 293
Query: 443 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDA 264
+A+QIR K+ L+DE RL + KPV+PR + K + RS KL ME LGVDMS + +A
Sbjct: 294 IAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENA 353
Query: 263 HFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR---VKVKR--------MAHAAIAK 117
+FT +P + ++R +KR + + AI K
Sbjct: 354 NFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRK 413
Query: 116 KTKKM------------GLKGEADRFIGTKMPKHLFAGK 36
K + M GLKGEADRFIGTKMPKHLF+GK
Sbjct: 414 KAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGK 452
>AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD23830
protein.
Length = 652
Score = 148 bits (358), Expect = 7e-36
Identities = 88/219 (40%), Positives = 117/219 (53%), Gaps = 23/219 (10%)
Frame = -3
Query: 623 DERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRE 444
+ERYD+IPE W+ HNIA YID DIF G+Y P + +D+T++EIRE
Sbjct: 425 EERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGVYKVPDMTMDETLKEIRE 484
Query: 443 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDA 264
+A+QIR K+ L+DE RL + KPV+PR + K + RS KL ME LGVDMS + +A
Sbjct: 485 IAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENA 544
Query: 263 HFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR---VKVKR--------MAHAAIAK 117
+FT +P + ++R +KR + + AI K
Sbjct: 545 NFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRK 604
Query: 116 KTKKM------------GLKGEADRFIGTKMPKHLFAGK 36
K + M GLKGEADRFIGTKMPKHLF+GK
Sbjct: 605 KAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGK 643
>AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA
protein.
Length = 652
Score = 148 bits (358), Expect = 7e-36
Identities = 88/219 (40%), Positives = 117/219 (53%), Gaps = 23/219 (10%)
Frame = -3
Query: 623 DERYDVIPEXWEXHNIAXYIDPDIFXXXXXXXXXXXXXXAGGMYAAPKIELDDTVREIRE 444
+ERYD+IPE W+ HNIA YID DIF G+Y P + +D+T++EIRE
Sbjct: 425 EERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGVYKVPDMTMDETLKEIRE 484
Query: 443 LARQIRNKKAILKDESRLVKQSTKPVMPRTSRAKTKQRSTSKLRKDMEKLGVDMSETGDA 264
+A+QIR K+ L+DE RL + KPV+PR + K + RS KL ME LGVDMS + +A
Sbjct: 485 IAKQIRGKRFELRDEKRLSSRKNKPVIPRNKQPKVRDRSVQKLVSTMEGLGVDMSGSENA 544
Query: 263 HFTXXXXXXXXXXXXXXXXXXXREPSNQPVADPIMR---VKVKR--------MAHAAIAK 117
+FT +P + ++R +KR + + AI K
Sbjct: 545 NFTKSVVDLRRGQVAVGSKKVPMQPLLDKESSAVVRKTGQPLKRAPSRDTLGIKNLAIRK 604
Query: 116 KTKKM------------GLKGEADRFIGTKMPKHLFAGK 36
K + M GLKGEADRFIGTKMPKHLF+GK
Sbjct: 605 KAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGK 643
>BT003546-1|AAO39550.1| 1214|Drosophila melanogaster RE04347p
protein.
Length = 1214
Score = 31.1 bits (67), Expect = 1.3
Identities = 41/170 (24%), Positives = 56/170 (32%), Gaps = 21/170 (12%)
Frame = -2
Query: 528 EGRGTARGWRHVRRAQDRAGRHREGDQGTG------PADTQQEGHPQGRVS--------- 394
+G+ +GW Q + G H++G QG P QQ GH QGR
Sbjct: 105 QGKQQVQGWTK----QGQQGGHQQGRQGQDGGYQQRPPGQQQGGHQQGRQGQEGGYQQRP 160
Query: 393 PG--EAVHEAGDAAHLASQDQAEVHLQAQEGHGETRRGHVGDXXXXXXXXXXXXXXXXXX 220
PG + H+ G Q Q Q GH + R+G GD
Sbjct: 161 PGQQQGGHQQGRQGQEGGYQQRPSG-QQQGGHQQGRQGQEGDYQQRPPGQQQGGHQQGRQ 219
Query: 219 XXXXXXXAGTLQPAGGRPHHARESKEDG----PRGHRQEDQEDGPQGRGG 82
G R+ +E G P G +Q + G QG+ G
Sbjct: 220 GQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEG 269
Score = 29.5 bits (63), Expect = 3.9
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 600 GDXGGTQHRRX--YRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRH-REGDQGTGPAD 430
G GG Q R + GH GR G+ G + ++ + GR +EGD P
Sbjct: 151 GQEGGYQQRPPGQQQGGHQ--QGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGDYQQRPPG 208
Query: 429 TQQEGHPQGR 400
QQ GH QGR
Sbjct: 209 QQQGGHQQGR 218
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + + G H++G QG
Sbjct: 266 GQEGGYQQRP---PGQQ--QGGHEQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQR 320
Query: 438 PADTQQEGHPQGR 400
P+ QQ GH QGR
Sbjct: 321 PSGQQQGGHQQGR 333
Score = 28.3 bits (60), Expect = 8.9
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + G H +G QG
Sbjct: 243 GQEGGYQQRP---PGQQ--QGGHQQGRQGQEGGYQQRPPGQQQGGHEQGRQGQEGGYQQR 297
Query: 438 PADTQQEGHPQGR 400
P+ QQ GH QGR
Sbjct: 298 PSGQQQGGHQQGR 310
>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
protein.
Length = 2267
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2
Query: 189 LQPAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGPVHRHQDAEA 52
L P+G H + ++ GP+ + + Q+ GP R H+ +A
Sbjct: 424 LSPSGNANHLYTQQQQQGPQQQQPQQQQQGPPHRFQQQHQQMSPQA 469
>AE014296-2533|AAF49620.2| 1217|Drosophila melanogaster CG7439-PC,
isoform C protein.
Length = 1217
Score = 29.5 bits (63), Expect = 3.9
Identities = 48/194 (24%), Positives = 62/194 (31%), Gaps = 21/194 (10%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + G H++G QG
Sbjct: 131 GQDGGYQQRP---PGQQ--QGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQR 185
Query: 438 PADTQQEGHPQGRVS---------PG--EAVHEAGDAAHLASQDQAEVHLQAQEGHGETR 292
P+ QQ GH QGR PG + H+ G Q Q Q GH + R
Sbjct: 186 PSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSG-QQQGGHQQGR 244
Query: 291 RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRPHHARESKEDG----PRGH 124
+G G G R+ +E G P G
Sbjct: 245 QGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQGRQGQEGGYQQRPSGQ 304
Query: 123 RQEDQEDGPQGRGG 82
+Q + G QG+ G
Sbjct: 305 QQGGHQQGRQGQEG 318
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + + G H++G QG
Sbjct: 269 GQEGGYQQRP---PGQQ--QGGHEQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQR 323
Query: 438 PADTQQEGHPQGR 400
P+ QQ GH QGR
Sbjct: 324 PSGQQQGGHQQGR 336
>AE014296-2532|AAF49619.2| 1214|Drosophila melanogaster CG7439-PB,
isoform B protein.
Length = 1214
Score = 29.5 bits (63), Expect = 3.9
Identities = 48/194 (24%), Positives = 62/194 (31%), Gaps = 21/194 (10%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + G H++G QG
Sbjct: 128 GQDGGYQQRP---PGQQ--QGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQR 182
Query: 438 PADTQQEGHPQGRVS---------PG--EAVHEAGDAAHLASQDQAEVHLQAQEGHGETR 292
P+ QQ GH QGR PG + H+ G Q Q Q GH + R
Sbjct: 183 PSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSG-QQQGGHQQGR 241
Query: 291 RGHVGDXXXXXXXXXXXXXXXXXXXXXXXXXAGTLQPAGGRPHHARESKEDG----PRGH 124
+G G G R+ +E G P G
Sbjct: 242 QGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQGRQGQEGGYQQRPSGQ 301
Query: 123 RQEDQEDGPQGRGG 82
+Q + G QG+ G
Sbjct: 302 QQGGHQQGRQGQEG 315
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = -2
Query: 600 GDXGGTQHRRXYRPGHL**XGRVGEGRGTARGWRHVRRAQDRAGRHREGDQGTG------ 439
G GG Q R PG G +GR G R + + G H++G QG
Sbjct: 266 GQEGGYQQRP---PGQQ--QGGHEQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQR 320
Query: 438 PADTQQEGHPQGR 400
P+ QQ GH QGR
Sbjct: 321 PSGQQQGGHQQGR 333
>L31626-1|AAA21800.1| 416|Drosophila melanogaster
homeodomain-containing protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 504 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 382
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>BT029256-1|ABK30893.1| 416|Drosophila melanogaster FI01103p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 504 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 382
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>AY051482-1|AAK92906.1| 497|Drosophila melanogaster GH14349p
protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVH 376
G GRG A G RR AG REGD G G PG+ H
Sbjct: 354 GAGRGGAAGGGSSRRGGG-AGASREGDSGLGYLPPTGGSGTSAMSGPGDNYH 404
>AE014296-2840|AAF49390.3| 497|Drosophila melanogaster CG9665-PA
protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 531 GEGRGTARGWRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEAVH 376
G GRG A G RR AG REGD G G PG+ H
Sbjct: 354 GAGRGGAAGGGSSRRGGG-AGASREGDSGLGYLPPTGGSGTSAMSGPGDNYH 404
>AE013599-403|AAF59260.1| 416|Drosophila melanogaster CG11121-PA
protein.
Length = 416
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 504 WRHVRRAQDRAGRHREGDQGTGPADTQQEGHPQGRVSPGEA 382
W RR +DRA H++G D+ + +G + P ++
Sbjct: 265 WFKNRRQRDRAAEHKDGSTDKQHLDSSSDSEMEGSMLPSQS 305
>AY052121-1|AAK93545.1| 1398|Drosophila melanogaster SD07366p
protein.
Length = 1398
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 441 GPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAE 331
GP D + EGH G S +A +A A L ++ Q +
Sbjct: 28 GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64
>AE014298-2166|AAF48466.2| 1398|Drosophila melanogaster CG33206-PA,
isoform A protein.
Length = 1398
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 441 GPADTQQEGHPQGRVSPGEAVHEAGDAAHLASQDQAE 331
GP D + EGH G S +A +A A L ++ Q +
Sbjct: 28 GPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQ 64
>AE014297-1753|AAF54983.1| 776|Drosophila melanogaster CG14366-PA
protein.
Length = 776
Score = 28.7 bits (61), Expect = 6.8
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 525 GRGTARGWRHVRRAQDRAGRHREGDQGTGPAD--TQQEGHPQGRV-SPGEAVHEAGDAAH 355
G G+ G A + R +G + + QQ+ HP R+ SP + +++ H
Sbjct: 521 GGGSGSGQPLYANAPPKPRRINDGGYSSPSPEHNEQQQQHPSRRLMSPTQQLYQ--QQQH 578
Query: 354 LASQDQAEVHLQAQEGHGETRRGHV 280
SQ Q + Q +TR GHV
Sbjct: 579 QRSQQQQQQQPQQHHAIYDTRTGHV 603
>AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA
protein.
Length = 119
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 183 PAGGRPHHARESKEDGPRGHRQEDQEDGPQGRGGP 79
P GG + + GP+G Q + GP G GGP
Sbjct: 42 PQGGPQGGPQGGPQGGPQGGPQGGPQGGPGGPGGP 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,444,161
Number of Sequences: 53049
Number of extensions: 453141
Number of successful extensions: 2462
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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