Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14k16
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029978-1|ABM92852.1|  178|Drosophila melanogaster IP18377p pro...    30   2.0  
BT029974-1|ABM92848.1|  178|Drosophila melanogaster IP18177p pro...    30   2.0  
BT029969-1|ABM92843.1|  178|Drosophila melanogaster IP18077p pro...    30   2.0  
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    30   2.6  
AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-P...    29   3.4  

>BT029978-1|ABM92852.1|  178|Drosophila melanogaster IP18377p
           protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 456 INKPNDAHDRTEIPMIIVNNPEQPIPNPGALNTPPPKTRRNL 331
           ++  ++ H+ T    I +   + PI  PGA   PPP+  R +
Sbjct: 116 VSSDDEDHNDTNTHAIYLRALKSPIQRPGAFKMPPPRVFREI 157


>BT029974-1|ABM92848.1|  178|Drosophila melanogaster IP18177p
           protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 456 INKPNDAHDRTEIPMIIVNNPEQPIPNPGALNTPPPKTRRNL 331
           ++  ++ H+ T    I +   + PI  PGA   PPP+  R +
Sbjct: 116 VSSDDEDHNDTNTHAIYLRALKSPIQRPGAFKMPPPRVFREI 157


>BT029969-1|ABM92843.1|  178|Drosophila melanogaster IP18077p
           protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 456 INKPNDAHDRTEIPMIIVNNPEQPIPNPGALNTPPPKTRRNL 331
           ++  ++ H+ T    I +   + PI  PGA   PPP+  R +
Sbjct: 116 VSSDDEDHNDTNTHAIYLRALKSPIQRPGAFKMPPPRVFREI 157


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 456  INKPNDAHDRTEIPMIIVNNPEQPIPNPGALNTPPPKTRRN 334
            ++  ++ H+ T    I +   + PI  PGA   PPP+  R+
Sbjct: 1362 VSSDDEDHNDTNTHAIYLRALKSPIQRPGAFKMPPPRVFRD 1402


>AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-PA
           protein.
          Length = 1150

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 459 KINKPNDAHDRTEIPMIIVNNPEQPIPNPG 370
           K N  N+A  +T +P+I  N  ++P PNPG
Sbjct: 214 KKNTGNNAPVQTSVPIIGANAKKRPNPNPG 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,863,166
Number of Sequences: 53049
Number of extensions: 455035
Number of successful extensions: 1466
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)