Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14k15
(236 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 108 4e-25
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 108 4e-25
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 108 4e-25
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 108 4e-25
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 108 4e-25
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 77 2e-15
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 65 7e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 2e-09
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 54 1e-08
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 54 1e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 53 3e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 1e-04
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 39 4e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.002
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 37 0.002
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 37 0.002
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.012
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.015
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 33 0.027
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.027
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 30 0.19
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 30 0.25
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 1.0
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 1.0
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 28 1.0
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 1.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 27 2.4
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 27 2.4
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 26 3.1
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 26 3.1
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 26 3.1
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 25 5.4
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical... 25 5.4
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 25 7.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 25 7.2
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 25 9.5
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 25 9.5
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 25 9.5
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 61 IQKESTL 67
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 61 IQKESTL 67
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 137 IQKESTL 143
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 213 IQKESTL 219
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 289 IQKESTL 295
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 365 IQKESTL 371
Score = 106 bits (254), Expect = 2e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 441 IQKESTL 447
Score = 74.1 bits (174), Expect = 1e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 79
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 61 IQKESTL 67
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 137 IQKESTL 143
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 213 IQKESTL 219
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 289 IQKESTL 295
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 365 IQKESTL 371
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 517 IQKESTL 523
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 593 IQKESTL 599
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 669 IQKESTL 675
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 745 IQKESTL 751
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 821 IQKESTL 827
Score = 106 bits (254), Expect = 2e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 441 IQKESTL 447
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 61 IQKESTL 67
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 137 IQKESTL 143
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 213 IQKESTL 219
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 289 IQKESTL 295
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 365 IQKESTL 371
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 441 IQKESTL 447
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 517 IQKESTL 523
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 593 IQKESTL 599
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 669 IQKESTL 675
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 745 IQKESTL 751
Score = 107 bits (257), Expect = 1e-24
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 39 IQKESTL 19
IQK+STL
Sbjct: 821 IQKQSTL 827
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 108 bits (260), Expect = 4e-25
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 39 IQKESTL 19
IQKESTL
Sbjct: 61 IQKESTL 67
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 40
M I +KTLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 39 IQKESTL 19
+ S L
Sbjct: 61 VLGGSVL 67
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 64.9 bits (151), Expect = 7e-12
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = -3
Query: 222 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 43
K+ + +KTL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 42 NIQKESTL 19
NI+ E +
Sbjct: 220 NIRDEDII 227
Score = 34.7 bits (76), Expect = 0.009
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 198 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 19
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 231 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 112
+S M + +KT TGKTIT E ++K ++ DK+GV
Sbjct: 55 DSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 2e-09
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 109
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = -3
Query: 213 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 34
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 33 KESTL 19
E+T+
Sbjct: 57 SEATI 61
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = -3
Query: 213 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 34
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 33 KESTL 19
E+T+
Sbjct: 57 SEATI 61
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 52.8 bits (121), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -3
Query: 222 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 43
+ QIF+K L G + + +TV D+K I + +P L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 42 NIQKESTL 19
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -3
Query: 213 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 76
+F+KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -3
Query: 189 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLPH 13
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 12 GV 7
V
Sbjct: 92 NV 93
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 162 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 19
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = -3
Query: 198 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 19
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = -3
Query: 198 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 19
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.012
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 201 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 43
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.015
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 162 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 31
++T+ +K +I V + R++ GK LED ++A YNIQ+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 33.1 bits (72), Expect = 0.027
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDS 61
+ + +TLT E +T+A++K +A ++G + Q+LI+ GK L+DS
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDS 106
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.027
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 162 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 19
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 30.3 bits (65), Expect = 0.19
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 43
M + IKT TGK IT E + +K ++ DK+GV G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 42 NIQKESTLP 16
IQ+ P
Sbjct: 56 KIQEAQQAP 64
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 222 KMQIFIKTLTGKTIT 178
++ +F+KT TGKTIT
Sbjct: 180 EIDVFVKTYTGKTIT 194
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.9 bits (64), Expect = 0.25
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 43
M + IKT TGKTIT E + +K ++ K+GV AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 42 NIQKESTLP 16
IQ+ P
Sbjct: 56 KIQEAQQAP 64
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 207 IKTLTGKTITAETEPAETVADLKQKIADKEGVPV 106
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 102 QQRLIFAGKQLEDSKTMADYNIQKESTLPH 13
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1910
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 102 QQRLIFAGKQLEDSKTMADYNIQKESTLPH 13
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1910
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 102 QQRLIFAGKQLEDSKTMADYNIQKESTLPH 13
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 9 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 38
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 102 QQRLIFAGKQLEDSKTMADYNIQKESTLPH 13
QQ+L KQ+E+++ +A+ N+QK L H
Sbjct: 1884 QQKLKTQKKQVEEAEELANLNLQKYKQLTH 1913
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVP 109
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVP 109
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 26.2 bits (55), Expect = 3.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -3
Query: 231 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 52
+ K IKT T + TA PAE V + K++ KE VP ++ + E++K
Sbjct: 39 DKTKAMSAIKTTTMGSTTANMHPAEPVVEKKEE--PKEKVPEKKEEEKKDATKKEEAKEE 96
Query: 51 ADYNIQKE 28
+KE
Sbjct: 97 KKEEERKE 104
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 82
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 82
+TLTG I ++EP A K + E P + QR++ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 26.2 bits (55), Expect = 3.1
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 228 SVKMQIF-IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 52
+VK ++ +K L KTI E++ + V +L+ + K DQ++ I AG ++E +K
Sbjct: 25 NVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAG-EVEPTKEQ 83
Query: 51 AD 46
D
Sbjct: 84 ID 85
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 208 HQNIDGQNHYRRNGTRRDG 152
H+NI+G H NGT +G
Sbjct: 725 HRNINGHGHMNGNGTHTNG 743
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 215 KYSSKH*RAKPLPPKRNPQRRWPISSKKLPIKKVCP*INKD 93
K SK P PK+N Q + S KLP K P KD
Sbjct: 348 KTVSKALSHSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKD 388
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 127 GNFLLEIGHRLCGFRFGGNGFARQCFDEYLHFYT 228
G +L + + C G GF F YLHF+T
Sbjct: 70 GKSMLYVSYGYCSLL--GEGFCFNIFAAYLHFHT 101
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = -3
Query: 219 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 64
+Q+ I + TGK++ E E + + D+EGV L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AL161712-22|CAO82055.1| 158|Caenorhabditis elegans Hypothetical
protein Y66D12A.16a protein.
Length = 158
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -2
Query: 190 QNHYRRNGTRRDGGRSQAKNXXXXXXXXRSTKTYLCGQTIGRFQNYGRLQYSKGI 26
+ H+RRN TRRD A S +T C + F+ +Q+ K +
Sbjct: 90 KEHHRRNETRRDYRSISAVETVHETIKIESRRTVACEGNV-YFEETNVIQFPKNL 143
>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
protein C04G2.6 protein.
Length = 1029
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 154 RLCGFRFGGNGFARQCFDEYL 216
++ + GNG +Q FDEYL
Sbjct: 217 QMAAYESSGNGNEKQIFDEYL 237
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = -3
Query: 177 AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 37
A+ + V D +++I D +P R + AG+ + + + YN+
Sbjct: 842 AKNRIEDVVEDYEKQITDNVTIPAQFHRGLLAGRGAKIHELQSKYNV 888
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -3
Query: 108 VDQQRLIFAGKQLEDSKTMADYNIQK 31
V+ L + G++L+D++++ YNI +
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQ 149
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 102 QQRLIFAGKQLEDSKTMADYNIQKESTLPHGV 7
QQ++ +Q+ED++++A N+ K L H V
Sbjct: 1882 QQKIKTYKRQIEDAESLASGNLAKYRQLQHVV 1913
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 34
+ LT A + ETV++L I D++ FA KQ++ TM D IQ
Sbjct: 298 QVLTASLHNAHAQLEETVSNLINVIQDQKKTLAKDIDNAFAAKQIQ--LTMVDKRIQ 352
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -3
Query: 204 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 34
+ LT A + ETV++L I D++ FA KQ++ TM D IQ
Sbjct: 298 QVLTASLHNAHAQLEETVSNLINVIQDQKKTLAKDIDNAFAAKQIQ--LTMVDKRIQ 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,964,939
Number of Sequences: 27780
Number of extensions: 110864
Number of successful extensions: 365
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 58
effective length of database: 11,128,958
effective search space used: 222579160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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