Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14j18
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 41 8e-05
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 35 0.005
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 34 0.009
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 34 0.009
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.027
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 33 0.027
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 32 0.036
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 30 0.19
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 0.33
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 29 0.33
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 0.58
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 28 0.77
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 0.77
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 0.77
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 1.0
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 27 1.3
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 27 1.3
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 1.8
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 1.8
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 1.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 1.8
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 2.3
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 26 3.1
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 3.1
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 25 4.1
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 4.1
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 25 4.1
SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20 |Schizosacc... 25 4.1
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 25 5.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.4
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 25 5.4
SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|c... 25 5.4
SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2 |... 25 5.4
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 25 5.4
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 25 7.2
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.2
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 24 9.5
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 41.1 bits (92), Expect = 8e-05
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = -2
Query: 435 LKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 256
LK ++ EQTQL K +L QQ ++ +LD K++ M + E+Q+ R
Sbjct: 640 LKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEE---EMQVLREGH 696
Query: 255 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL---IKHKNLLQNEYTTLQS 103
E +K ++++KL + + N+ ++S+KN +L ++ L N L+S
Sbjct: 697 ESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALES 750
Score = 33.1 bits (72), Expect = 0.020
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = -2
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
+ ++LD IKN + + ++L +S + KSLN+ A L +KN +L N+ +L+ K
Sbjct: 710 LTKQLDDIKNQFGIISSKNRDL----LSELEKSKSLNNSLAALESKNKKLENDLNLLTEK 765
Score = 25.0 bits (52), Expect = 5.4
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Frame = -2
Query: 450 ESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE--- 280
E + +K ++ + Q +++L+ + M+E++ ++ + + K F E
Sbjct: 649 EQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHS 708
Query: 279 ---LQLKRISTEKAL-KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 130
QL I + + S N D K+ L+N L +KN +L NLL
Sbjct: 709 KLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLL 762
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 35.1 bits (77), Expect = 0.005
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = -2
Query: 375 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 196
+L ++++ ++EK + + +D ++ K + L+ + K L SLN ++ +L K A
Sbjct: 86 ELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAI 145
Query: 195 LSNENKVLSNKN 160
E + L+ +N
Sbjct: 146 NVKEGRQLTTEN 157
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.3 bits (75), Expect = 0.009
Identities = 20/86 (23%), Positives = 45/86 (52%)
Frame = -2
Query: 435 LKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 256
+K+L ++ Q +L + ++LQ +QEKL ++ YNN+ + + + + +
Sbjct: 274 IKELEEEVETQKRLTALWESKSSELQSEVAALQEKLTSQQSLYNNVTEELNNNKQQLLIS 333
Query: 255 EKALKSLNDDYAKLAAKNARLSNENK 178
E +L+ L + Y + ++ ++ ENK
Sbjct: 334 ENSLRELQEKYDSVVSE-LQVVKENK 358
Score = 27.5 bits (58), Expect = 1.0
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = -2
Query: 375 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 196
D KLQQ ++ +LDR+ N +++ + K+ ++ + +++ N+ Y +++
Sbjct: 392 DNMKLQQKVSSLKLQLDRLTNKFSSFCEQVKQ-RIPVVKQQRSEIVRNNIYMNFLSESLE 450
Query: 195 LSNENKVLSNKNIELIKHK 139
SN N L+ EL+ K
Sbjct: 451 TSNNN--LTKVQAELLSTK 467
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 34.3 bits (75), Expect = 0.009
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = -2
Query: 330 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL 151
LDR N+Y+ + KS EL KSLN+ + L+ A L E++ N + L
Sbjct: 873 LDRYGNEYDILLKSEHELDSSLEEMRNRHKSLNEHFIMLSDSMANLQVEHE---NMSALL 929
Query: 150 IKHKNLLQNEYTTLQSYK 97
+K K L+N+ S K
Sbjct: 930 LKEKMYLKNQTVEQASLK 947
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 32.7 bits (71), Expect = 0.027
Identities = 29/118 (24%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Frame = -2
Query: 435 LKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 256
++KL +I + ++ + + ++LQ+ ++E+ ++ K D + + E QLK
Sbjct: 601 VEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLE-QLKMTEA 659
Query: 255 E-KALKSLNDDYAK-LAAKNARL--SNENKVLSNKNIELIKHK-NLLQNEYTTLQSYK 97
E +L+ N++ + +A K + L SN+NK+L N+ IE + + + L+ E ++ + K
Sbjct: 660 EVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSK 717
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 32.7 bits (71), Expect = 0.027
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = -2
Query: 393 NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 214
N++ +L + +L + + ++DR K ++ + + LQL+ ++ DDY K+
Sbjct: 145 NMEDELRITRLASENNVLISRIDRTKRHFSELFTQKQMLQLQN-------ENFKDDYEKI 197
Query: 213 AAKNARLSNENKVLSNK 163
+N RL E K +K
Sbjct: 198 KEENKRLYKERKSFLSK 214
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 32.3 bits (70), Expect = 0.036
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = -2
Query: 453 SESQAILKKLXIDIAEQTQLNIKRQLDL--NKLQQTSVFMQEKLDRIKN---DYNNMHKS 289
+ QA K +DI E + QL++ +K ++ V + ++IK N+HK+
Sbjct: 208 ARDQARKKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNNQIKTLKAQNLNIHKN 267
Query: 288 FKELQLKRISTEKALKSLNDDYAKLAAKNARL 193
F+++Q + I T L S + + L + A L
Sbjct: 268 FQKIQSELIQTNSGLYSTKKELSALQVRYATL 299
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.9 bits (64), Expect = 0.19
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = -2
Query: 453 SESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQ 274
SE +A +K I +A Q ++ K + + + + ++ + + K + K E +
Sbjct: 518 SEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAE-ENAKREAEEQAKREAEEK 576
Query: 273 LKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
KR + EKA + + + A +NA+ E K
Sbjct: 577 AKREAEEKAKREAEEKAKREAEENAKREAEEK 608
Score = 24.6 bits (51), Expect = 7.2
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -2
Query: 405 QTQLNIKRQLDLN-KLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND 229
+ + N KR+ + K + +E ++ K + K E + KR + EKA + +
Sbjct: 596 EAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEE 655
Query: 228 DYAKLAAKNARLSNENK 178
+ A +NA+ E K
Sbjct: 656 KAKREAEENAKREAEEK 672
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 29.1 bits (62), Expect = 0.33
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -2
Query: 387 KRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK-------SFKELQLKRISTEKALKSLND 229
K Q + L + + +QE L+ +KND N+ + KE + K + E + +D
Sbjct: 333 KLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMKEARQKLNNKEALISHYDD 392
Query: 228 DYAKLAAKNARLS 190
D+ K +RLS
Sbjct: 393 DFRAKELKISRLS 405
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 0.33
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = -2
Query: 357 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
QT+ ++L++I + NN K+ K R +K L+ + AKLA KN S++
Sbjct: 21 QTAQNPLKELEKIL-ERNNKQKNKKSRNQVRREKKKLLREKTNSGAKLAEKN---SDDKD 76
Query: 177 VLSNKNIELIKHKNLLQNEYTT 112
L+ N L K N Y T
Sbjct: 77 QLTENNDNLYNDKKSNGNFYDT 98
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 0.58
Identities = 23/93 (24%), Positives = 43/93 (46%)
Frame = -2
Query: 384 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK 205
+Q + L + + + EKLD+ + DY + + ++ + + KSL + +L
Sbjct: 199 KQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERL--- 255
Query: 204 NARLSNENKVLSNKNIELIKHKNLLQNEYTTLQ 106
L + NK +S L + +N L+ E TLQ
Sbjct: 256 EKLLVSSNKTVST----LRQTENSLRAECKTLQ 284
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 27.9 bits (59), Expect = 0.77
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 384 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDY 223
R L+ N + + Q++++R+ Y+N+ +E LK + EK DDY
Sbjct: 448 RDLEFNDEDEDEI-EQDEIERVLQKYDNIPLLNEEQALKEKNVEKDFIQWKDDY 500
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 0.77
Identities = 25/108 (23%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -2
Query: 420 IDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALK 241
+D++ L+ + L + ++++ +Q+K ++ +Y N+ + LQ + + E AL+
Sbjct: 781 LDVSNTAILSFEDSLRRERDEKST--LQQKCLNLQYEYENVRIELENLQSRALELESALE 838
Query: 240 SLNDDYAKLAAKNARLSNENKVLS--NKNIELIKHKNLLQNEYTTLQS 103
D AK +K S +K+LS N+N + +K + + + + L+S
Sbjct: 839 QSVSD-AKY-SKAIMQSGLSKLLSSINENKDNLKEFSKSKQKISYLES 884
Score = 27.5 bits (58), Expect = 1.0
Identities = 17/83 (20%), Positives = 39/83 (46%)
Frame = -2
Query: 399 QLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 220
Q N + Q L + + S ++ + +++ DY+ + F+E K +S +K ++L
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 219 KLAAKNARLSNENKVLSNKNIEL 151
+++ + + + L N EL
Sbjct: 734 QISEELVDYRSRCEALEYGNYEL 756
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 0.77
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -2
Query: 390 IKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLA 211
IK + +K+ + + ++DR+K + N + +E ++ L L ++YA +
Sbjct: 3311 IKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMI 3370
Query: 210 AKNARLS---NENKVLSNKNIELIKHKNLLQNEYT 115
++ + +E K ++IE+I ++ +NE++
Sbjct: 3371 SEIHSMELQMDEVKCKMQRSIEVITDLSIERNEWS 3405
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 1.0
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -2
Query: 447 SQAILKKLXI-DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 271
S A LK + + +I E L + DL ++ +Q L+ +K+ N F+EL
Sbjct: 1144 SDASLKYIELQEIHENLLLKVS---DLENYKKKYEGLQLDLEGLKDVDTN----FQELSK 1196
Query: 270 KRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 130
K +SL A K + S+ENK LSNK L K N L
Sbjct: 1197 KHRDLTFNHESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
Score = 25.4 bits (53), Expect = 4.1
Identities = 17/80 (21%), Positives = 40/80 (50%)
Frame = -2
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
++ K+ + ++Y+ + K+F++ + K + + + L ++L +K KVL
Sbjct: 1253 LERKITNLMHEYSQLGKTFEDEKRKALIASRDNEELRSLKSELESKRKLEVEYQKVL--- 1309
Query: 162 NIELIKHKNLLQNEYTTLQS 103
E +K L++E T L++
Sbjct: 1310 --EEVKTTRSLRSEVTLLRN 1327
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.1 bits (57), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 243 KSLNDDYAKLAAKNARLSNENKVLSN-KNIELIKHKNLLQNE 121
K+ D + L K+ L N + L++ + ++ IKHK++ QNE
Sbjct: 189 KTRKVDASALEKKSCLLPNSSGTLTDQRGLDTIKHKSIEQNE 230
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 1.3
Identities = 20/104 (19%), Positives = 50/104 (48%)
Frame = -2
Query: 414 IAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 235
+ + ++I+ + K+Q V + +++ +K+D+ N+++ + +K L +
Sbjct: 289 VRNEESIDIRSYVFHKKIQLIKVTISSEMNILKSDFANLYRPY-----FNFLRQKKLIPI 343
Query: 234 NDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 103
N + + A +S S+KN++ K K+ + + +T L S
Sbjct: 344 NCECLNIKAYTLFVSLRKYSFSSKNVQ-SKEKSKIMSCFTLLIS 386
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/65 (18%), Positives = 32/65 (49%)
Frame = -2
Query: 375 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 196
+ +KLQ+ + E+ +++ + + + + Q+K++S E+ N ++ + K +
Sbjct: 212 ETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQFQIKKLSLERQYDCANLEFEHNSRKLEK 271
Query: 195 LSNEN 181
L N
Sbjct: 272 LQKMN 276
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -2
Query: 384 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 220
R+ ++ + ++T + DR++ +M S + L+ +K L++L DDYA
Sbjct: 235 RRREIRQARKTRRSDAQSYDRLRRLRQSMETSLQLLEQVYKREQKKLQALEDDYA 289
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 26.6 bits (56), Expect = 1.8
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAK---LAAKNARLSNENKVL 172
MQ++LD Y + K+ +ELQ K + + + Y+K LA ++A L E + L
Sbjct: 19 MQKELDLSFERYERLFKTTQELQEKVKFSSSRFYNKDSTYSKDQGLAKESAAL--ELQKL 76
Query: 171 SNKNIELIKHKNLLQ 127
+N+ L K N L+
Sbjct: 77 KQENVLLRKDLNNLE 91
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 1.8
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Frame = -2
Query: 387 KRQLDLNKLQQTSV---FMQEKLDRIKNDYNNMHKSFKELQLK--RIST---EKALKSLN 232
K++L+ KLQ+T+ +++++ + + N+ K ++ K R++ EK
Sbjct: 1368 KQELE-TKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAWNEKCENLKK 1426
Query: 231 DDYAKLAAKNARLSNENKVLSNKNIE 154
+ A L+N+NK L++KN E
Sbjct: 1427 SSLTRFAHLKQELTNKNKELTSKNAE 1452
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = -2
Query: 417 DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKS 238
+I+ + L+ + L+ +++ + K ++ DY N+ ++ + EKA+
Sbjct: 938 EISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINE 997
Query: 237 LNDDYAKLAAKNARLSNE 184
N + +L K RL +E
Sbjct: 998 KNLNIRELNEKLMRLDDE 1015
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 2.3
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -2
Query: 420 IDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKN-DYNNMH--KSFKELQLKRISTEK 250
I E QL+ K +L +L+ ++E ++++ D H + + L+ +R E+
Sbjct: 76 IQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQ 135
Query: 249 ALKSLNDDYAKLAAK 205
L+ + D Y K+ A+
Sbjct: 136 KLEEMTDKYTKVKAE 150
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/56 (17%), Positives = 26/56 (46%)
Frame = -2
Query: 321 IKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 154
I N Y++MH+ + + + ++ + D+A L ++ + + V + +E
Sbjct: 67 ISNVYSDMHEKISDFSVTKEQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVE 122
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 104 DCNVVYSFCNKFLCLINSIFLFDK 175
+C VYS+ N LCLI S +F K
Sbjct: 35 NCLEVYSYENNRLCLITSANIFAK 58
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 25.4 bits (53), Expect = 4.1
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = -2
Query: 261 STEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
S++K ++ L +N + L+ + K+ LQ +Y+T SYK
Sbjct: 89 SSKKKIEELVSSIESFQGENGEAKTGSTSLTRSASATVSRKSSLQEKYSTRFSYK 143
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 4.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 184
+QEK DR+K N + +E+ + + EK L D +L A NE
Sbjct: 412 VQEKEDRLKQSENELRTRHREM---KAALEKQKADLIDHKNRLMQAKAAAENE 461
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 4.1
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -2
Query: 288 FKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNE 121
+KE R + KS+N ++ K + +++L KN + KNL++ E
Sbjct: 39 YKEWVSLRFELDNTNKSINRVQKEIGLKMKAKEDASELLEEKNSLTERKKNLIEQE 94
>SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 290
Score = 25.4 bits (53), Expect = 4.1
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 432 KKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTE 253
+KL +D +++ +KRQ+DL K E D I N+ + + L + E
Sbjct: 36 RKLSVDSTKKSPKRLKRQVDLQKSSFNDKTFNES-DVISNERFKSNDLLELLPAPKNQAE 94
Query: 252 KALKS 238
A KS
Sbjct: 95 LAPKS 99
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 5.4
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = -2
Query: 333 KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 154
KL ++NN K F+E + I K S A + L N L K +
Sbjct: 260 KLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINS---LEKKVSD 316
Query: 153 LIKHKNLLQ 127
+ K LL+
Sbjct: 317 IALEKQLLE 325
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.0 bits (52), Expect = 5.4
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -2
Query: 330 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN 187
LD IK+ + H S KEL +R ++ +++L + AKL+ + ++S+
Sbjct: 257 LDTIKDVESYAH-SLKELLKRRDQKQQDVEALQEYSAKLSLERDKISS 303
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 237 LNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
L ++ KLA++ L+NE ++ K I+ K + N L+ YK
Sbjct: 3195 LLSEWEKLASREYSLANEMDLIKKKIIDWRKFELSNWNNLLKLEEYK 3241
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.0 bits (52), Expect = 5.4
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -2
Query: 411 AEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLN 232
A + Q+ ++ +K + ++ + K D + N MHKS L + ++ SLN
Sbjct: 278 ASEDQIIPQQTNKFHKSKSSTALFKSKKDS-SSSLNKMHKSESHSALNNLHKSESGTSLN 336
Query: 231 DDYAKLAAKNA--RLSNENKVL 172
+ +K+ + LSN N L
Sbjct: 337 NRRSKVGPGSCFFCLSNPNVAL 358
>SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 169
Score = 25.0 bits (52), Expect = 5.4
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = -2
Query: 339 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 160
+EKL + + K+ L ++ S L+S+N + ++++ L + N
Sbjct: 56 EEKLRALDKLQLDASKNLSNLLVEYNSINAELESVNSKISSISSQEYALEEFQALSQNFE 115
Query: 159 IELIKHKNLLQNE 121
L++H+ QN+
Sbjct: 116 KNLVQHRRNSQNK 128
>SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 372 LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 235
++KL+ VF+ EKL+ N H F +L + A+ SL
Sbjct: 1 MSKLEALQVFLLEKLNEKNEIPNTSHLEFDGKKLGPQEAQSAILSL 46
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 345 FMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAK 217
++ E LD +KN +NM K + I A+ S D +K
Sbjct: 756 YLVENLDLVKNGCSNMVKHIQNCHKFNIPVVVAINSYKTDSSK 798
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 24.6 bits (51), Expect = 7.2
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = -2
Query: 447 SQAILKKLX-IDIA-EQTQLNIKRQLD-LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 277
SQ +L+ L I+++ +Q L I+ +NKL+QT M K + ++ + N+ K+ +
Sbjct: 66 SQLVLQSLNQINMSMQQVALGIQDYASRINKLEQTMSDMNLKFEALQKEQNSNTKTLADC 125
Query: 276 QLK-RISTEKALKSLNDDYAKLAAKNAR-LSNENKVLSN 166
+ I T+K L Y + K R + N+ SN
Sbjct: 126 TSQMTIITKKLDAELKKRY--MTTKQTRTVQNQTMPRSN 162
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 24.6 bits (51), Expect = 7.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 348 VFMQEKLDRIKNDYNNMHKSFKE--LQLKRISTEKAL 244
+ + E+ IKN Y+NM K E LQLK + + AL
Sbjct: 214 MIVTEQARFIKNPYDNMAKKRFEILLQLKNVLSSSAL 250
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 24.2 bits (50), Expect = 9.5
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 333 KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
K D + DY+ SFK+LQ K+ + K K L + + N++L +
Sbjct: 148 KRDHKQLDYDRHRSSFKKLQEKKDKSLKDEKKLYEAETAFEQSSQEYEYYNEMLKEE 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,268,255
Number of Sequences: 5004
Number of extensions: 18913
Number of successful extensions: 119
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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