Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14j18
(454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 42 2e-04
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 36 0.012
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 35 0.027
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 35 0.035
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 35 0.035
10_05_0100 - 9161144-9161682,9161860-9162058 33 0.14
01_01_0472 - 3473096-3474288,3474833-3474938 32 0.25
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 31 0.43
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 31 0.57
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 31 0.57
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 31 0.57
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 31 0.57
10_07_0196 + 13978647-13979142,13979242-13980542 30 0.76
08_02_0011 - 11234393-11235348,11235364-11235700 30 0.76
08_02_0009 + 11216532-11218687,11220727-11225998 30 0.76
08_02_0008 + 11212351-11214506,11214548-11214584 30 0.76
08_02_0007 + 11208170-11210325,11210367-11210403 30 0.76
08_02_0003 + 11180421-11180757,11180773-11185715 30 0.76
08_02_0002 + 11173365-11173512,11173528-11178470 30 0.76
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 30 0.76
05_01_0488 - 4070506-4072277,4072455-4072557 30 1.0
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 30 1.0
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 29 1.3
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 29 1.3
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 29 1.3
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 29 1.7
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 29 1.7
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 2.3
03_02_0900 - 12262149-12262565,12262924-12263061,12263387-122634... 29 2.3
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087... 28 3.1
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 4.0
10_08_0269 - 16366392-16366403,16366469-16368262 28 4.0
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 28 4.0
03_06_0676 - 35460281-35460648,35462097-35462382 28 4.0
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 4.0
11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977 27 5.3
08_02_0118 + 12772636-12772910,12773151-12773254,12774097-127744... 27 5.3
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 27 5.3
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 27 5.3
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241... 27 7.1
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 27 7.1
11_06_0185 + 21018045-21022307 27 9.3
08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036 27 9.3
05_02_0076 - 6365230-6365240,6365634-6365805,6365990-6366031,636... 27 9.3
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 27 9.3
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 41.9 bits (94), Expect = 2e-04
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = -2
Query: 453 SESQAILKKLXIDIAEQTQL-------NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMH 295
S++Q LKKL ++A + Q N + Q +L L Q QE+L++ + + + +
Sbjct: 492 SKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSELEALDQKVKMQQEELEQKQKELKSFN 551
Query: 294 KSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYT 115
+F+E Q KR+ E AL S + A+ + RL+ E ++ + K EL + K L+N +
Sbjct: 552 LTFQEEQDKRLQAESALLSEGKELAQ-CQEVQRLTMEIQMANEKLNELKQTKVNLENAVS 610
Query: 114 TLQ 106
L+
Sbjct: 611 ELK 613
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -2
Query: 381 QLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAK- 205
Q D K Q+ +++LD+ K +YN + K+ EL+ + E L+ D KLA +
Sbjct: 981 QEDYKKTQEMMDNHKDELDKTKVEYNKLKKAMDELRSSEVDVEYKLQ----DTKKLAKEW 1036
Query: 204 NARLSNENKVLSNKNIELIKHKNLLQNE 121
++ K L + L+KH + +Q +
Sbjct: 1037 EMKVKAFRKKLDDIQTNLVKHMDQIQKD 1064
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -2
Query: 414 IAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 235
I+E+ N + DLNKL ++EK++ K Y + + +++ +K ++S+
Sbjct: 772 ISEEAVANAEN--DLNKLVDQLNRLREKINDAKKGYRALEDAKSRFEMELAKAKKEVESM 829
Query: 234 NDDYA 220
N ++
Sbjct: 830 NAQFS 834
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -2
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
+QE++ ++K+ NN++ F+ + + E AL + DY L + +L E +N
Sbjct: 311 LQEEIQKLKDKINNLNSYFEFYESESNKLESALAKKHSDYNDLRKQRDKLQEERNYEANV 370
Query: 162 NIELIKHKNLLQN 124
E + K L N
Sbjct: 371 TAEKDRLKENLVN 383
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 34.7 bits (76), Expect = 0.035
Identities = 20/100 (20%), Positives = 47/100 (47%)
Frame = -2
Query: 450 ESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 271
E+ ++K+ + + + ++N ++ +L+ ++ + K +Y + +EL
Sbjct: 944 EAPPVIKETPVLVEDTEKIN-SLTAEVEQLKALLQTERQATETAKKEYAEAERRNEELIK 1002
Query: 270 KRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL 151
K EK ++ L D +L K + +ENKVL + + +
Sbjct: 1003 KFEGAEKKIEQLQDTVQRLEEKATNMESENKVLRQQAVAI 1042
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 34.7 bits (76), Expect = 0.035
Identities = 20/96 (20%), Positives = 47/96 (48%)
Frame = -2
Query: 393 NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 214
+++R L N+ Q+ +QE++ ++K++ NN++ + + + E AL ++DY L
Sbjct: 397 DLERVLLSNRKQEG--LLQEEIQKLKDEINNLNSYIESRKSESSKLESALAKKHNDYNDL 454
Query: 213 AAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQ 106
+ L E K + ++ + L+++ Q
Sbjct: 455 RKQRDELQEERKSFWKEEADVTAEIDRLKDDLVKAQ 490
>10_05_0100 - 9161144-9161682,9161860-9162058
Length = 245
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 255 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYKC 94
E +KS KLAA+ +L EN L N+N EL + ++N++ TL C
Sbjct: 167 EDEVKSPEPSIHKLAAQVKKLRKENIELRNRNAELGVELSEIRNDFDTLSCGLC 220
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 31.9 bits (69), Expect = 0.25
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = -2
Query: 453 SESQAILKKLXIDIAEQTQLNIKRQLDLN----KLQQTSVFMQEKLDRIKNDYNNMHKSF 286
S S A + K ++A+ ++ ++ +L + +LQ+T ++ KL+ + + + F
Sbjct: 294 SRSDAEIDKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIKLEEVSEEKLLVENKF 353
Query: 285 KELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLS-NKNIELIKHK-NLLQNEYTT 112
K+L+ EK + L+ KL+ + R +E ++L+ N+ IE +K K + E +
Sbjct: 354 KQLEEANSEAEKYNQELSHATEKLSEEKFR--HEAEILALNQAIENLKSKLESIAKEKSL 411
Query: 111 LQSY 100
L+S+
Sbjct: 412 LKSW 415
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 31.1 bits (67), Expect = 0.43
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = -2
Query: 408 EQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND 229
E+ +L + R+ N+LQ+ +E++ RIK+D F+E + + I ++ L
Sbjct: 423 EEEKLLLHREAIHNELQKE----REEIQRIKSDLEKEKAFFEEEKREAIQAQQDLAITQA 478
Query: 228 DYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNE 121
D +L +L E L + EL+ + LQ E
Sbjct: 479 DRDELLTLQMKLKEEIDSLRAQKRELMADADRLQAE 514
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 30.7 bits (66), Expect = 0.57
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -2
Query: 450 ESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 271
E KKL +D + L +K Q+ ++L+ +++D+ K+D + K LQ
Sbjct: 297 EKSIAKKKLELDKKQPELLRLKEQI--SRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQS 354
Query: 270 KRISTEKALKSLND 229
+ +A+ LN+
Sbjct: 355 ALVDVTRAIDELNE 368
Score = 29.5 bits (63), Expect = 1.3
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = -2
Query: 387 KRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAA 208
K++L+L+K Q + ++E++ R+K+ + + KE+ K+ ++K L+ + + L
Sbjct: 302 KKKLELDKKQPELLRLKEQISRLKSKIKSCN---KEIDKKKDDSKKHLEEMKSLQSALVD 358
Query: 207 KNARLSNENKVLSNKNIELIKHKNLLQNEY 118
+ N+ NK+ +L + LQ EY
Sbjct: 359 VTRAIDELNEQGQNKSDKLQLADDQLQ-EY 387
Score = 28.7 bits (61), Expect = 2.3
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -2
Query: 408 EQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLND 229
E+ QL + L KL ++ + K +M +L+ R S EK LKSL +
Sbjct: 829 EERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQAPIIKLKETRESLEKELKSLQE 888
Query: 228 DYAKLAAKNARLSNENKVL 172
++ A+ ++SN+ + L
Sbjct: 889 RESEARAEAEQISNQMEEL 907
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 30.7 bits (66), Expect = 0.57
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -2
Query: 363 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAK-LAAKNARLSN 187
L++ + + +LD++KND H EL K + EK S+ ++ K + A+ RLS
Sbjct: 253 LERANQNLYSELDKLKNDSKERH---GELNEKHVELEKLSISIQEEQLKSMQAEMTRLSL 309
Query: 186 ENKVLSNK 163
E ++ K
Sbjct: 310 EKQLAQAK 317
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 30.7 bits (66), Expect = 0.57
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = -2
Query: 450 ESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 271
ES + L IAE ++ +L ++ QEKLD N + ++ ++L
Sbjct: 478 ESNIAKQVLTNKIAEAEAVSKVLSDELASVRDVLQKTQEKLDVTSNQLVSTMEAREDLNK 537
Query: 270 KRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQ 127
+ + K L+S D+ + NA L+ E + L ++I + + LQ
Sbjct: 538 ELLDAYKKLESATDELVRERKINATLNRELEALVEQSIVESEARQALQ 585
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 30.7 bits (66), Expect = 0.57
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = -2
Query: 438 ILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIS 259
+ ++L +++ + L+ + QL++ +Q S ++ L+ + + + + ELQ K S
Sbjct: 814 LTEELRVELEKSKSLSERLQLEVESEKQCSEELKGALEMAMQGHARILEQYCELQEKHAS 873
Query: 258 TEKALKSLND---DYAKLAAKNARLSNENKVLS 169
+++ND D K AAK E+K ++
Sbjct: 874 LLSMCRTINDGIEDVKKEAAKAGVRGAESKFIN 906
>10_07_0196 + 13978647-13979142,13979242-13980542
Length = 598
Score = 30.3 bits (65), Expect = 0.76
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = -2
Query: 408 EQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND---------YNNMHKSFKELQLKRIST 256
E + N+KR L+LNK ++++ + + +R + N +H+ +Q++ +
Sbjct: 316 ESSPENLKRLLELNKKSMSALYKELEEERSASAIAASQAMAMINKLHEEKAAMQMEALQY 375
Query: 255 EKALKSLND-DYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNE 121
+ ++ D D+ + + L+ K L + + EL + L+QNE
Sbjct: 376 LRMMEEQADHDHEAIQNLHDLLTEREKELLDMDAELENFRRLVQNE 421
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 306 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 364
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 365 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 405
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 308 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 366
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 367 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 407
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 1022 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 1080
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 1081 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 1121
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 308 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 366
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 367 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 407
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 308 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 366
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 367 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 407
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 306 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 364
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 365 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 405
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 30.3 bits (65), Expect = 0.76
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = -2
Query: 372 LNKLQQTSV--FMQEKLDRIKNDYNNMHKSF------KELQLKR-ISTEKALKSLNDDYA 220
+ KL Q S + + KL I +YNN K KEL R ++ K +K N+D A
Sbjct: 243 MEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKK-NEDMA 301
Query: 219 KLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
KN +K N L + + +NE L+SY+
Sbjct: 302 VEIFKNQEQDKHDKEEQNLGKILSEEEQWAENERLFLESYE 342
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 30.3 bits (65), Expect = 0.76
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = -2
Query: 375 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 196
++ +L+ + +++ D ++ + ++ +E Q K T+ ++ + +L K A
Sbjct: 1521 EVEELKTSLQSEKQRADDLEKKRSEEQQANEEKQKKMEETDVKMRQFQEYLRRLEEKLAN 1580
Query: 195 LSNENKVLSNKNIELIKHKNLLQNEYTTLQ 106
+ +ENKVL + + + K L + LQ
Sbjct: 1581 VESENKVLRQQAVSMAPSKILSGRSKSILQ 1610
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = -2
Query: 282 ELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTL 109
E +LK++ EKA +SLN + +++ N L+N L L+ K+L+ N+ TTL
Sbjct: 469 EAELKQVYDEKANESLNSE-KEISRLNQELANVKTDLE----LLLSEKSLVDNKVTTL 521
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = -2
Query: 390 IKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALK----SLNDDY 223
++++ DL + ++ +EKL + + N K +E Q + ALK SL +D
Sbjct: 359 VQKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQNDLDTKSNALKKWEESLQNDE 418
Query: 222 AKLAAKNARLSNENKVLSNKNIEL 151
+L+ + ++ NE K +EL
Sbjct: 419 KQLSEQKLQIENERKQAEMYKLEL 442
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = -2
Query: 372 LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARL 193
L L+ + QEK +R+K + + + F + + EKA + +N + KL L
Sbjct: 183 LQNLKSEILHTQEKFNRLKEEMQSGFQPFTTADERSVLLEKANQEMNLELNKL---KHML 239
Query: 192 SNENKVLSNKNIELIK 145
+++ L+ K EL K
Sbjct: 240 KQKHEELNEKQAELEK 255
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 339 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 160
Q +LD+I+ + N K +L+ K+ ++S + +LAAK + L K
Sbjct: 46 QFELDKIRQELNKTSKEIGKLKAKKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKL 105
Query: 159 IEL 151
+ +
Sbjct: 106 VTI 108
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -2
Query: 339 QEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 160
Q +LD+I+ + N K +L+ K+ ++S + +LAAK + L K
Sbjct: 46 QFELDKIRQELNKTSKEIGKLKAKKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKL 105
Query: 159 IEL 151
+ +
Sbjct: 106 VTI 108
>05_03_0468 +
14376926-14377183,14377534-14377710,14377802-14377867,
14378009-14378134,14378499-14378678,14379015-14379179,
14380185-14380538
Length = 441
Score = 29.1 bits (62), Expect = 1.7
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = -2
Query: 450 ESQAILKKLXIDIAEQTQ-LNIKRQLDLNKLQQTSV--FMQEKLDRIKNDYNNMHKSFKE 280
E + I++ DI +T+ LNI+R+ + Q + F Q L + DY K+ ++
Sbjct: 210 EGRTIVENKTADIIHETRKLNIRRKGAGSTTQGEAPQRFTQRNLPQNPLDYETQLKASRD 269
Query: 279 LQLKRISTEKAL----KSLNDDYAKLAAKNARLSNENKVL 172
+ + K L K++ D A + A+L +ENK+L
Sbjct: 270 VANAMAAKAKLLLRELKTVKADLAFAKERCAQLEDENKIL 309
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/104 (20%), Positives = 45/104 (43%)
Frame = -2
Query: 432 KKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTE 253
+ L I+ ++Q K + +++ L+ T + + D YN + L+ +
Sbjct: 431 QSLKEQISSESQRANKAESEIHSLKDTISCLISEKDTTLLQYNESTRRLSVLECEISKAH 490
Query: 252 KALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNE 121
LK L+DD A K ++N + ++ +E + K +Q +
Sbjct: 491 MELKKLSDDMAMEVDKLKCAESQNSAMQSE-LETLDQKVRVQEQ 533
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = -2
Query: 378 LDLNKLQQTSVFMQ--EKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDY--AKLA 211
L+L + ++MQ +L + +D++ E QL + E LKSLND + +K A
Sbjct: 732 LNLQLSNKNDMYMQLESQLSQAGDDHSKTRSLLSEAQLHKEELELNLKSLNDLHVESKTA 791
Query: 210 AKNA 199
A++A
Sbjct: 792 AESA 795
>03_02_0900 -
12262149-12262565,12262924-12263061,12263387-12263446,
12263557-12263619,12264181-12264243,12264420-12264482,
12265076-12265153,12265673-12266080
Length = 429
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 357 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
Q V ++EKL+ ++N Y+ + K L K S E +L L + + L NK
Sbjct: 181 QNEVRLEEKLNNLQNGYDVLIKKEVALDNKVRSIEVINDALTHQETSLKERLSGLEETNK 240
Query: 177 VL 172
VL
Sbjct: 241 VL 242
>03_05_0407 -
23906388-23906966,23907028-23907915,23908141-23908753,
23908858-23909021
Length = 747
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 369 NKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQL 271
N+L+QT V + ++L + DY+ H + ++ QL
Sbjct: 715 NRLRQTRVPVHQRLGPVNQDYDQEHDNSRKTQL 747
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/92 (21%), Positives = 43/92 (46%)
Frame = -2
Query: 393 NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 214
N+K+ D ++ V +E L+ +++ ++ S + LQ + KAL L + +
Sbjct: 1933 NLKQNKD-ELMENLHVLSEENLN-LRSVVGSLESSIESLQTELDGKTKALMELQYSHTTI 1990
Query: 213 AAKNARLSNENKVLSNKNIELIKHKNLLQNEY 118
+ S ++ ++ +L NLL++EY
Sbjct: 1991 LEEFKLKSKATELGVSRENDLRSENNLLKHEY 2022
>10_08_0269 - 16366392-16366403,16366469-16368262
Length = 601
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 309 YNNMHKSFKELQLKRISTEKALKSLNDDYAKLAA--KNARLSNENKVLSNKNIELIKHKN 136
Y + F+EL K+LN DYA L + + SNE +S++ ++ H N
Sbjct: 398 YEELVSMFEELHAYSEKEIVKFKALNKDYASLDVLYEELKTSNERLTISHEKLK-EAHDN 456
Query: 135 LL 130
LL
Sbjct: 457 LL 458
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 273 LKRISTEKALKSLNDDYAKLA-AKNARLSNENKVLSNKNIELIKHKNLLQNE 121
+ ++ +LK L AK A + +L+ +KVL NKN++L ++ QN+
Sbjct: 251 INEVTITPSLKDLVFAQAKTTDALSKKLAANDKVLENKNVKLDGFASVFQNQ 302
>03_06_0676 - 35460281-35460648,35462097-35462382
Length = 217
Score = 27.9 bits (59), Expect = 4.0
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = -2
Query: 333 KLDRIKNDYNNMHKSFKELQLK-RISTEKA------LKSLNDDYAKLAAKNARLSNENKV 175
KL ++ N + ++LQ++ R+ EK +K L+ + AKL +L +E++
Sbjct: 114 KLITLRKAANTSREEVEKLQMENRLFREKEEKSSSEIKKLHQEIAKLNESMKKLKSESED 173
Query: 174 LSNKNIELIKHKNLLQNE 121
K +E H N LQ +
Sbjct: 174 HERKVLEAEAHVNALQKQ 191
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/94 (20%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = -2
Query: 453 SESQAILKKLXIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE-- 280
++S++ + KL +++ E ++N L ++KLQ MQE L + ++ K+ +
Sbjct: 515 TDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSKALSDEL 574
Query: 279 LQLKRI--STEKALKSLNDDYAKLAAKNARLSNE 184
+ +K + ++ L++ +++ A + L E
Sbjct: 575 VSVKEMVHKGQEELEATSNELASIVEARDNLKKE 608
>11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977
Length = 522
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 363 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDD 226
L Q + Q ++ + +YN + K+LQ+ ST +ALK D
Sbjct: 471 LDQPGIKQQGRVQQALLEYNRQTEEHKQLQVAPGSTVRALKRFRKD 516
>08_02_0118 +
12772636-12772910,12773151-12773254,12774097-12774487,
12774795-12774870,12775030-12775047
Length = 287
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 255 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTL 109
E +KSL KLAA +L EN L + N EL ++N + TL
Sbjct: 205 EDEVKSLEPSIHKLAAHVKKLRKENIELRDCNAELGVELAEIRNNFDTL 253
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/97 (19%), Positives = 42/97 (43%)
Frame = -2
Query: 393 NIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKL 214
++K + + ++ EKL+ ++ + + ++ +E + + EK+L+ L
Sbjct: 773 DVKTAVQICSSEEFEQLKSEKLN-LEAELSKCNEVIEETKFRFKELEKSLEELTSKLVAS 831
Query: 213 AAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 103
N+ + K ++ L K L+NE LQS
Sbjct: 832 EKSNSLAETQLKCMAESYKSLESRKAELENEIKVLQS 868
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 243 KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQSYK 97
K L DD L NA LS + K NIEL+ ++LQ T++ K
Sbjct: 397 KELEDDVKFLKESNANLSIQLKNTQEANIELV---SILQELEETIEEQK 442
>02_03_0049 +
14421408-14421942,14421988-14422842,14423847-14424151,
14424469-14424984
Length = 736
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 261 STEKALKSLNDDYAKLA-AKNARLSNENKVLSNKNIELIKHKNLLQNE 121
S + +LK L +AK + + +L+ K+L NKN++L + QN+
Sbjct: 34 SNQPSLKDLVFAHAKTTDSLSKKLAANEKILENKNVKLDGFASTFQNQ 81
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.1 bits (57), Expect = 7.1
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = -2
Query: 393 NIKRQLD--LNKLQQTSVFMQEKLDRIKNDY---NNMHKSFKELQLKRISTEKALKSLND 229
+++RQL+ +KLQ + +Q + +R ++ N K+F+E K+ L+ ND
Sbjct: 877 SLERQLEEARSKLQDEIIKLQGEKERALDNLQQSNTSIKTFEEELEKQREHNSILQLAND 936
Query: 228 DYAKLAAKNARLSNENKVLSNKNI-ELIKHKN 136
D K A + + KV S+ I L + KN
Sbjct: 937 DLHKSIANLEKELEDTKVSSHAEILALQEQKN 968
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 387 KRQLDLNKLQQTSVFMQEKLDRIKNDY-NNMHKSFKELQLK 268
K LD K + + EKLD+IK+D HKS K L LK
Sbjct: 319 KGVLDKIKRNIKKMNIYEKLDKIKSDIREGQHKSGKLLLLK 359
>08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036
Length = 420
Score = 26.6 bits (56), Expect = 9.3
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = -2
Query: 378 LDLNKLQQTSVF---MQEKLDRIKNDYNNMHKSFKELQLK---RISTEKALKSLNDDY-A 220
L N L + F M+ KL+ +K +++ +L+ K +T LK+ + A
Sbjct: 55 LQKNGLMKEKAFNKEMKRKLEELKATTSSLRTQKTDLKTKIKGLEATATTLKNREKELEA 114
Query: 219 KLAAKNARLSNENKVLSNKN 160
LA KN+R+S L++KN
Sbjct: 115 VLAEKNSRVSQMEATLTDKN 134
>05_02_0076 -
6365230-6365240,6365634-6365805,6365990-6366031,
6366274-6366373,6366468-6366529,6367069-6367150,
6368041-6368072
Length = 166
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 222 AKLAAKNARLSNENKVLSNKNIELIKHKNLLQNE 121
AKL + L N N+ L NI + H+ L Q E
Sbjct: 45 AKLKQQITNLQNSNRTLVGDNITTMNHRELKQLE 78
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 234 NDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 103
NDD AA S ++++ S +EL +H+++L E+T L S
Sbjct: 897 NDDSDTKAASGEAKSQDDQIQS---VELEQHESILHEEHTELGS 937
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,059,843
Number of Sequences: 37544
Number of extensions: 91034
Number of successful extensions: 393
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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