Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc14j02
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051598-1|AAK93022.1| 1019|Drosophila melanogaster GH23906p pro...    31   1.7  
BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p pro...    30   3.9  
AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector en...    30   3.9  
AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA...    30   3.9  

>AY051598-1|AAK93022.1| 1019|Drosophila melanogaster GH23906p
           protein.
          Length = 1019

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 516 LHNQRRQSVGLKAMCVRGRFQNYNDFVNLSQSVLIPLQSFDSSTHGIY 659
           +  QRRQ + L+    R +    N+F++  QSV  P+++      GIY
Sbjct: 1   MERQRRQEMELRLQQQREQAAQVNNFIHAPQSVFRPIENETQPQPGIY 48


>BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p
           protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 701 TDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHK 591
           T ++TR +HD+  TI T+   + +LER     +E+++
Sbjct: 109 TKIDTRILHDITRTIATLKPLVGSLERTPFRKQEMYR 145


>AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector
           enhancer of KSR proteinCNK protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 701 TDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHK 591
           T ++TR +HD+  TI T+   + +LER     +E+++
Sbjct: 109 TKIDTRILHDITRTIATLKPLVGSLERTPFRKQEMYR 145


>AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA
           protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 701 TDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHK 591
           T ++TR +HD+  TI T+   + +LER     +E+++
Sbjct: 109 TKIDTRILHDITRTIATLKPLVGSLERTPFRKQEMYR 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,587,726
Number of Sequences: 53049
Number of extensions: 480157
Number of successful extensions: 1160
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)