Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14h17
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 186 6e-47
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 186 6e-47
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 173 4e-43
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 162 8e-40
AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal... 56 1e-07
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 48 2e-05
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 48 2e-05
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 48 2e-05
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 48 3e-05
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 48 3e-05
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 48 3e-05
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 48 3e-05
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 48 3e-05
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 47 6e-05
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 42 0.002
BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing ... 31 3.3
AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing ... 31 3.3
AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing ... 31 3.3
AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing ... 31 3.3
AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens ... 31 3.3
AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled recep... 31 4.3
AK130499-1|BAC85365.1| 220|Homo sapiens protein ( Homo sapiens ... 30 7.6
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 186 bits (453), Expect = 6e-47
Identities = 89/169 (52%), Positives = 115/169 (68%)
Frame = -2
Query: 557 KVXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPRIPVRANEGDAYVL 378
KV Q+ D CR+A +ALVA G + ++ +ATENM+AGD I S + R+ V A EGDA+ L
Sbjct: 125 KVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPL 184
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVV 198
GALP+GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A V
Sbjct: 185 GALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATV 244
Query: 197 GRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 51
GR+SNV H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 245 GRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 293
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 186 bits (453), Expect = 6e-47
Identities = 89/169 (52%), Positives = 115/169 (68%)
Frame = -2
Query: 557 KVXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPRIPVRANEGDAYVL 378
KV Q+ D CR+A +ALVA G + ++ +ATENM+AGD I S + R+ V A EGDA+ L
Sbjct: 125 KVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPL 184
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVV 198
GALP+GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A V
Sbjct: 185 GALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATV 244
Query: 197 GRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 51
GR+SNV H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 245 GRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 293
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 173 bits (421), Expect = 4e-43
Identities = 86/169 (50%), Positives = 112/169 (66%)
Frame = -2
Query: 557 KVXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPRIPVRANEGDAYVL 378
KV Q+ D + +ALVA G + ++ +ATENM+AGD I S + R+ V A EGDA+ L
Sbjct: 125 KVIQVRYD---PSDIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPL 181
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVV 198
GALP+GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A V
Sbjct: 182 GALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATV 241
Query: 197 GRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 51
GR+SNV H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 242 GRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 290
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 162 bits (394), Expect = 8e-40
Identities = 78/149 (52%), Positives = 102/149 (68%)
Frame = -2
Query: 557 KVXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPRIPVRANEGDAYVL 378
KV Q+ D CR+A +ALVA G + ++ +ATENM+AGD I S + R+ V A EGDA+ L
Sbjct: 125 KVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPL 184
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVV 198
GALP+GT+++ VE EPG+G YI AAGT G ++RK + I+Q+PSKR + C+A V
Sbjct: 185 GALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGHSIIQLPSKRQMQVLETCVATV 244
Query: 197 GRLSNVLHGSTPIGSPQRNRWLGNRPRSG 111
GR+SNV H IG RNRWLG RP SG
Sbjct: 245 GRVSNVDHNKRVIGKAGRNRWLGKRPNSG 273
>AB051617-1|BAB54945.1| 56|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 56
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = -2
Query: 176 HGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVK 51
H IG RNRWLG RP SG W RK G GRKI+P P+K
Sbjct: 3 HNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMK 44
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 45 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 104
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMA 204
G +P GTIV C+E++PG G A+G T++ + + V++PS + A
Sbjct: 105 GTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Query: 203 VVG 195
VVG
Sbjct: 165 VVG 167
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 46.8 bits (106), Expect = 6e-05
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = -2
Query: 545 IIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVLGAL 369
II D R A +A V D ++ TE A + I T + + N G+ +G +
Sbjct: 2 IIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTM 61
Query: 368 PIGTIVHCVEKEPGQGGLYIHAAGTSGTIV--RKQDDRVIVQMPSKRLFSFNQLCMAVVG 195
P GTIV C+E++PG G A+G T++ + + V++PS + AVVG
Sbjct: 62 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 121
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 41.5 bits (93), Expect = 0.002
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -2
Query: 554 VXQIIEDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLP-RIPVRANEGDAYVL 378
V II D R A +A V D ++ TE A + I T + + N G+ +
Sbjct: 41 VKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPV 100
Query: 377 GALPIGTIVHCVEKEPGQGGLYIHAAG 297
G +P GTIV C+E++PG G A+G
Sbjct: 101 GTMPEGTIVCCLEEKPGDRGKLARASG 127
>BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 539 EDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPR 417
+ GCRT + L +G L L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing 1
protein.
Length = 208
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 539 EDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPR 417
+ GCRT + L +G L L ++ + D+ K S K+P+
Sbjct: 165 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 205
>AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing 1
protein.
Length = 214
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 539 EDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPR 417
+ GCRT + L +G L L ++ + D+ K S K+P+
Sbjct: 171 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 211
>AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 539 EDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPR 417
+ GCRT + L +G L L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21087 fis, clone CAS03323. ).
Length = 253
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 539 EDGCRTAHVALVAVGDKLKYSLATENMKAGDIIKTSCKLPR 417
+ GCRT + L +G L L ++ + D+ K S K+P+
Sbjct: 204 KSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKLSMKMPK 244
>AB209096-1|BAD92333.1| 580|Homo sapiens G protein-coupled receptor
61 variant protein.
Length = 580
Score = 30.7 bits (66), Expect = 4.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 317 LYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNR 138
L + A + T +K D+ +I+Q+P L + L + + GS +GSP + R
Sbjct: 50 LAVTKADPAATSGQKGDELLILQLPGLALCTQTNLPKRLQWEVPPTKPGSLGLGSPSQGR 109
Query: 137 W--LGNRP 120
W +G+ P
Sbjct: 110 WTRMGDGP 117
>AK130499-1|BAC85365.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ26989 fis, clone SLV03395. ).
Length = 220
Score = 29.9 bits (64), Expect = 7.6
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -1
Query: 354 SALRRERTWSRRSIHTRGRHVWD---HREETRRQSYCSDAFQKTI*FQSALYGRCWSSVQ 184
++ R +RT S S+H R HV H + + S Q+T+ SA R + Q
Sbjct: 19 TSARAQRTVSTHSVHARSAHVSTCSAHSTHSAHGHHTSACAQRTVSTHSAHGQRTSARAQ 78
Query: 183 RS-SRQHT 163
R+ S QHT
Sbjct: 79 RTVSTQHT 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,461,528
Number of Sequences: 237096
Number of extensions: 1973216
Number of successful extensions: 5082
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5077
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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