Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc14g14
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075303-1|AAL68170.1| 334|Drosophila melanogaster AT31457p pro... 30 2.6
AE013599-1616|AAF58439.2| 334|Drosophila melanogaster CG13322-P... 30 2.6
AE013599-1615|AAM68619.1| 334|Drosophila melanogaster CG13322-P... 30 2.6
AE013599-1614|AAM68618.1| 334|Drosophila melanogaster CG13322-P... 30 2.6
BT003263-1|AAO25020.1| 450|Drosophila melanogaster LD22594p pro... 29 6.0
BT001556-1|AAN71311.1| 504|Drosophila melanogaster RE12395p pro... 29 6.0
BT001503-1|AAN71258.1| 504|Drosophila melanogaster LD35207p pro... 29 6.0
AE013599-398|AAF59266.2| 450|Drosophila melanogaster CG11166-PB... 29 6.0
AE013599-397|AAS64903.1| 504|Drosophila melanogaster CG11166-PG... 29 6.0
AE013599-396|AAS64902.1| 504|Drosophila melanogaster CG11166-PF... 29 6.0
AE013599-395|AAM68890.1| 504|Drosophila melanogaster CG11166-PE... 29 6.0
AE013599-394|AAM68889.1| 504|Drosophila melanogaster CG11166-PD... 29 6.0
AE013599-393|AAM68888.1| 504|Drosophila melanogaster CG11166-PC... 29 6.0
AE013599-392|AAF59263.2| 504|Drosophila melanogaster CG11166-PA... 29 6.0
AE014296-3326|AAF49032.3| 362|Drosophila melanogaster CG6663-PA... 29 7.9
>AY075303-1|AAL68170.1| 334|Drosophila melanogaster AT31457p
protein.
Length = 334
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 269 NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 102
N+ A QTA SL I PN E + + + + +R L+P +AN K N +++
Sbjct: 29 NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88
Query: 101 NVLD 90
+L+
Sbjct: 89 GLLN 92
>AE013599-1616|AAF58439.2| 334|Drosophila melanogaster CG13322-PC,
isoform C protein.
Length = 334
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 269 NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 102
N+ A QTA SL I PN E + + + + +R L+P +AN K N +++
Sbjct: 29 NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88
Query: 101 NVLD 90
+L+
Sbjct: 89 GLLN 92
>AE013599-1615|AAM68619.1| 334|Drosophila melanogaster CG13322-PB,
isoform B protein.
Length = 334
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 269 NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 102
N+ A QTA SL I PN E + + + + +R L+P +AN K N +++
Sbjct: 29 NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88
Query: 101 NVLD 90
+L+
Sbjct: 89 GLLN 92
>AE013599-1614|AAM68618.1| 334|Drosophila melanogaster CG13322-PA,
isoform A protein.
Length = 334
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 269 NTTASQTAASLL----INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETV 102
N+ A QTA SL I PN E + + + + +R L+P +AN K N +++
Sbjct: 29 NSNACQTATSLANCYESVGINPNANERCALETDELLSSRTPLKPAKANNCDTKRNSFKSL 88
Query: 101 NVLD 90
+L+
Sbjct: 89 GLLN 92
>BT003263-1|AAO25020.1| 450|Drosophila melanogaster LD22594p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 226 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 268
>BT001556-1|AAN71311.1| 504|Drosophila melanogaster RE12395p
protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>BT001503-1|AAN71258.1| 504|Drosophila melanogaster LD35207p
protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-398|AAF59266.2| 450|Drosophila melanogaster CG11166-PB,
isoform B protein.
Length = 450
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 226 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 268
>AE013599-397|AAS64903.1| 504|Drosophila melanogaster CG11166-PG,
isoform G protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-396|AAS64902.1| 504|Drosophila melanogaster CG11166-PF,
isoform F protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-395|AAM68890.1| 504|Drosophila melanogaster CG11166-PE,
isoform E protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-394|AAM68889.1| 504|Drosophila melanogaster CG11166-PD,
isoform D protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-393|AAM68888.1| 504|Drosophila melanogaster CG11166-PC,
isoform C protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE013599-392|AAF59263.2| 504|Drosophila melanogaster CG11166-PA,
isoform A protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 381 YGHWQ-QHVANTKKPP--QQTAGKPFGANANGGRRHVANHQHH 262
+GH + Q + PP QQ +G NGG H QHH
Sbjct: 280 HGHGKRQQMHQRLSPPMAQQQQPSNYGRGYNGGHNHAQQQQHH 322
>AE014296-3326|AAF49032.3| 362|Drosophila melanogaster CG6663-PA
protein.
Length = 362
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = -2
Query: 203 SLKILSTQSVGARNLLEPMQA--NET--KIKLNRIETVNVLDFLGSVYD 69
+L + +++G LLE ++A NET ++KL + +T +VL +VYD
Sbjct: 225 NLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDTVYD 273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,325,819
Number of Sequences: 53049
Number of extensions: 618697
Number of successful extensions: 2143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2136
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -